Sequence 1: | NP_651593.1 | Gene: | CG5003 / 43344 | FlyBaseID: | FBgn0039554 | Length: | 713 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001185415.1 | Gene: | SKP2B / 844036 | AraportID: | AT1G77000 | Length: | 360 | Species: | Arabidopsis thaliana |
Alignment Length: | 296 | Identity: | 56/296 - (18%) |
---|---|---|---|
Similarity: | 104/296 - (35%) | Gaps: | 103/296 - (34%) |
- Green bases have known domain annotations that are detailed below.
Fly 119 LPMGILEEILGRATEKTHTIKICGPPSSQHVAGEFR-----------------QFTQTLSSVFPR 166
Fly 167 VVQLKVLELEGVSLDFEYIHITEFPATLRRLK--LKDCSVRVGDTPKSIFYSIELHLLDLEDLSI 229
Fly 230 EDNSWFEPYYIMGLSK-LPSLRRLSLKGCQA--------LCKFVPYGSMAARFGFQKLESLDLRQ 285
Fly 286 TPINNSDLQCFSAI-ENLKELLLESPQILHSKQAVAKKNTNGNATDEAASPQPD-------SLKV 342
Fly 343 LSDDEPSTSRAAMEHLRA-----CKVAFNLDNCSDR 373 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CG5003 | NP_651593.1 | F-box | 68..114 | CDD:279040 | |
leucine-rich repeat | 610..635 | CDD:275381 | |||
SKP2B | NP_001185415.1 | F-box | 28..63 | CDD:395521 | 8/38 (21%) |
leucine-rich repeat | 66..91 | CDD:275381 | 2/24 (8%) | ||
leucine-rich repeat | 92..118 | CDD:275381 | 10/54 (19%) | ||
AMN1 | <115..264 | CDD:187754 | 34/174 (20%) | ||
leucine-rich repeat | 119..144 | CDD:275381 | 5/24 (21%) | ||
leucine-rich repeat | 145..170 | CDD:275381 | 7/35 (20%) | ||
leucine-rich repeat | 171..197 | CDD:275381 | 7/34 (21%) | ||
leucine-rich repeat | 198..223 | CDD:275381 | 4/24 (17%) | ||
leucine-rich repeat | 224..249 | CDD:275381 | 2/24 (8%) | ||
leucine-rich repeat | 250..272 | CDD:275381 | 6/21 (29%) | ||
leucine-rich repeat | 294..319 | CDD:275381 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D1046098at2759 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 1.010 |