Sequence 1: | NP_651593.1 | Gene: | CG5003 / 43344 | FlyBaseID: | FBgn0039554 | Length: | 713 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_569047.1 | Gene: | SKIP2 / 836860 | AraportID: | AT5G67250 | Length: | 527 | Species: | Arabidopsis thaliana |
Alignment Length: | 321 | Identity: | 59/321 - (18%) |
---|---|---|---|
Similarity: | 111/321 - (34%) | Gaps: | 96/321 - (29%) |
- Green bases have known domain annotations that are detailed below.
Fly 71 DFCDELLFEIFQYLDTSSILAVMHCSPRFENLLLDHRFYHHIDLSNGPLPMGILEEILGRATEKT 135
Fly 136 HTIKICGPPSSQHVAGEFRQFTQTLSSVFPRVVQLKV-LELEGVSLDFEYIHITEFPA-TLRRLK 198
Fly 199 LKDCSVRVGDTPKSIFYSIELHLLDLEDLSIEDNSWFEPYYIMGLSKLPSLRRLSL-------KG 256
Fly 257 CQAL---CKFVPYGSMAARFGFQKLESLDLRQTP--INNSDLQ--CFSAIEN--LKELLLESPQI 312
Fly 313 LHSKQAVAKKNTNGNATDEAASPQPDSLKVLSDDEPSTSRAAMEHLRACKVAFN-LDNCSD 372 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CG5003 | NP_651593.1 | F-box | 68..114 | CDD:279040 | 12/42 (29%) |
leucine-rich repeat | 610..635 | CDD:275381 | |||
SKIP2 | NP_569047.1 | F-box-like | 45..>73 | CDD:403981 | 7/27 (26%) |
AMN1 | 82..295 | CDD:187754 | 48/282 (17%) | ||
leucine-rich repeat | 106..128 | CDD:275381 | 6/21 (29%) | ||
leucine-rich repeat | 135..160 | CDD:275381 | 9/53 (17%) | ||
leucine-rich repeat | 161..185 | CDD:275381 | 7/23 (30%) | ||
leucine-rich repeat | 239..264 | CDD:275381 | 2/35 (6%) | ||
leucine-rich repeat | 265..288 | CDD:275381 | 4/22 (18%) | ||
leucine-rich repeat | 289..314 | CDD:275381 | 59/321 (18%) | ||
AMN1 | <311..>416 | CDD:187754 | |||
leucine-rich repeat | 315..342 | CDD:275381 | |||
leucine-rich repeat | 343..367 | CDD:275381 | |||
leucine-rich repeat | 368..393 | CDD:275381 | |||
leucine-rich repeat | 394..418 | CDD:275381 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D1046098at2759 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.920 |