DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5003 and Fbxl22

DIOPT Version :9

Sequence 1:NP_651593.1 Gene:CG5003 / 43344 FlyBaseID:FBgn0039554 Length:713 Species:Drosophila melanogaster
Sequence 2:NP_780415.1 Gene:Fbxl22 / 74165 MGIID:1921415 Length:236 Species:Mus musculus


Alignment Length:204 Identity:42/204 - (20%)
Similarity:71/204 - (34%) Gaps:62/204 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   198 KLKDCSVRVGDTPKSIFYSIELHLLDLEDLSIED--------------NSWFEPYYIMGLSKLPS 248
            :||..:.|:....:|:  ||..|...::..||||              .|....:.:...::.|:
Mouse    53 ELKKDNFRLSPALRSL--SICWHSSRVQVCSIEDWLKSALQRSICSQHESLVNDFLLQVCNRCPN 115

  Fly   249 LRRLSLKGCQALCKFVPYGSMAARFGFQKLESLDLRQTPINNSDLQCFSAIENLKELLLESPQIL 313
            |..::|.||..:..                               .|      |..|||..|::.
Mouse   116 LTSVTLSGCGHVTD-------------------------------DC------LARLLLSCPRLR 143

  Fly   314 HSKQAVAKKNTNGNATDEAASPQPDSLKVLSDDE-PSTSRAAMEHLR-ACKVAFNLDNCSDRKEE 376
            ..:.....:.|  |.|..|.:....:|:.|..|. .:.|.|.:..|| ||.   ||...::|  .
Mouse   144 TLRLENCARVT--NRTLAAVAAHGRALQTLHVDFCRNVSAAGLLRLRAACP---NLRLSAER--S 201

  Fly   377 KSPVPTEPP 385
            .:.:|.:||
Mouse   202 AAMIPDQPP 210

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5003NP_651593.1 F-box 68..114 CDD:279040
leucine-rich repeat 610..635 CDD:275381
Fbxl22NP_780415.1 F-box-like 3..43 CDD:403981
LRR 1 15..40
LRR 2 43..72 6/20 (30%)
AMN1 45..>200 CDD:187754 38/190 (20%)
LRR 3 98..123 4/24 (17%)
leucine-rich repeat 116..141 CDD:275381 9/61 (15%)
LRR 4 124..149 7/61 (11%)
leucine-rich repeat 142..167 CDD:275381 4/26 (15%)
LRR 5 150..175 6/26 (23%)
leucine-rich repeat 168..193 CDD:275381 9/27 (33%)
LRR 6 176..201 9/29 (31%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167843093
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR16134
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.030

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