DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5003 and Fbxl20

DIOPT Version :9

Sequence 1:NP_651593.1 Gene:CG5003 / 43344 FlyBaseID:FBgn0039554 Length:713 Species:Drosophila melanogaster
Sequence 2:XP_017453008.1 Gene:Fbxl20 / 64039 RGDID:621722 Length:453 Species:Rattus norvegicus


Alignment Length:469 Identity:97/469 - (20%)
Similarity:150/469 - (31%) Gaps:150/469 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 PQIPTEEEPEIKQRKREKEHKESLDRETECNLMDFCDELLFEIFQYLDTSSILAVMHCSPRFENL 102
            |..|.|...|:........:..|...|...| .....|||..||.:||..::......|..:..|
  Rat    12 PWDPYERRQELTSANSPLSYMFSNSDEAVIN-KKLPKELLLRIFSFLDVVTLCRCAQVSRAWNVL 75

  Fly   103 LLDHRFYHHIDLSNGPLPMGILEEILGRATEKTHTIKICG----PPSSQHVAG----EFRQFTQT 159
            .||...:..|||      .....:|.||..|  :..|.||    ..|.:...|    ..|.|.|.
  Rat    76 ALDGSNWQRIDL------FDFQRDIEGRVVE--NISKRCGGFLRKLSLRGCLGVGDNALRTFAQN 132

  Fly   160 LSSVFPRVVQLKVLELEGV--SLDFEYIHITEFPATLRRLKLKDCSVRVGDTPKSIFYSIELHLL 222
            ..::       :||.|.|.  :.|.....:::|.:.||.|.|..|:.....:.|::.....|   
  Rat   133 CRNI-------EVLSLNGCTKTTDATCTSLSKFCSKLRHLDLASCTSITNMSLKALSEGCPL--- 187

  Fly   223 DLEDLSIEDNSWFEPYYIMGLSKL----PSLRRLSLKGC-----------------------QAL 260
             ||.|:|   ||.:.....|:..|    ..|:.|.||||                       |..
  Rat   188 -LEQLNI---SWCDQVTKDGIQALVRGCGGLKALFLKGCTQLEDEALKYIGAHCPELVTLNLQTC 248

  Fly   261 CKFVPYGSMAARFGFQKLESLDLRQTPINNSDLQCFSAIENLKELLLES-----PQILHSKQAVA 320
            .:....|.:....|..||:||             |.|...|:.:.:|.:     |::...:.|..
  Rat   249 LQITDEGLITICRGCHKLQSL-------------CASGCSNITDAILNALGQNCPRLRILEVARC 300

  Fly   321 KKNTNGNATDEAAS---------------------------PQ---------------------- 336
            .:.|:...|..|.:                           |:                      
  Rat   301 SQLTDVGFTTLARNCHELEKMDLEECVQITDSTLIQLSIHCPRLQVLSLSHCELITDDGIRHLGN 365

  Fly   337 ----PDSLKVLS-DDEPSTSRAAMEHLRACK--VAFNLDNC-----SDRKEEKSPVP-------- 381
                .|.|:|:. |:.|..:.|::|||::|.  ....|.:|     :..|..::.:|        
  Rat   366 GACAHDQLEVIELDNCPLITDASLEHLKSCHSLERIELYDCQQITRAGIKRLRTHLPNIKVHAYF 430

  Fly   382 ---TEPPSEGQDLQ 392
               |.|||.|...|
  Rat   431 APVTPPPSVGGSRQ 444

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5003NP_651593.1 F-box 68..114 CDD:279040 13/45 (29%)
leucine-rich repeat 610..635 CDD:275381
Fbxl20XP_017453008.1 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166346645
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1046098at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.850

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