DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5003 and fbxl3l

DIOPT Version :10

Sequence 1:NP_651593.1 Gene:CG5003 / 43344 FlyBaseID:FBgn0039554 Length:713 Species:Drosophila melanogaster
Sequence 2:XP_693270.2 Gene:fbxl3l / 564855 ZFINID:ZDB-GENE-130530-598 Length:448 Species:Danio rerio


Alignment Length:524 Identity:92/524 - (17%)
Similarity:166/524 - (31%) Gaps:203/524 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly   207 GDTPKSIFYSIELHLLDLEDLSIEDNS--------WFEPYYIMGLSKLPSLRRLSLKGCQALCKF 263
            |:.|    :.:.||:  .:.||:.|.:        |.|.::|      |.|.|            
Zfish    57 GNLP----HHVVLHI--FQYLSLVDRARASSVCRRWNEVFHI------PDLWR------------ 97

  Fly   264 VPYGSMAARFGFQKLESLD--LRQTPINNSDLQCFSAIENLKELLLESPQILHSKQAVAKKNTNG 326
                    ||.|:..:...  ||.|   :.||        :::::....|.|   |.|:.|..:.
Zfish    98 --------RFEFELNQPATSYLRST---HPDL--------IQQIIKRHAQHL---QYVSFKVDSC 140

  Fly   327 NATDEAA--------SPQPDSLKVLSDDEPSTSRAAMEH-LRACKVAF-NLDNCSDRKEEKSPVP 381
            ..:.|||        :....:|.::|...||....:..| :.|..|.| |..:.|..|.:.:|| 
Zfish   141 TESAEAACNILSQLVNCTIKTLGLISTARPSFMDVSQSHFVSALTVVFVNSKSLSSIKIDDTPV- 204

  Fly   382 TEPPSEGQDLQAKRIRAPSESDDEDTSSTSGSSSDKLEVLSLPRNGHSNAAPL-------SGGVD 439
                                 ||........::||.|::|.:....|.:.|.:       .|..:
Zfish   205 ---------------------DDPSLKVLVANNSDTLKLLKMSSCPHVSPAGILCVADQCHGLRE 248

  Fly   440 LPPLPHAAD----AANAADAPIAVDAANIEAPGQSPGLDPRPPRAYIYVPDAENANPRQQRSVVA 500
            |....|...    .|.:::..:.::...|:...::||                            
Zfish   249 LALNYHLLSDELLLALSSEKHVHLEHLRIDVVSENPG---------------------------- 285

  Fly   501 VFAQGTEQRYIYVNQQFSLPMNVLMPTRRHRTHPRPNYDQVVQHPMFWNMLEPLDRDYARRVRPR 565
                         ..||             .|..:.::|.:::|                     
Zfish   286 -------------QTQF-------------HTIKKSSWDALIRH--------------------- 303

  Fly   566 PPSCQTTPQYYVTDRAMYSFGRADRPVQPDVVWIRNINRSPDNKLERLSLRNYHLITNHTLEHLV 630
            .|.......:::.:.....|.|.:.|| ..:.:.|.:::   :.|.|:.|....|:      .||
Zfish   304 SPQVNIVMYFFLYEEEFEPFFREETPV-THLYFGRAVSK---DMLGRIGLNCPRLV------ELV 358

  Fly   631 QCSPNLVYID-----VSGTSITLPAIRRFKISKPKCEVVANHLEEF-----ERLPELETQEE--- 682
            .|:..|..:|     ::....:|.|     |...:|||..:...||     .||.:|...||   
Zfish   359 VCANGLEPLDEELIRIADRCKSLTA-----IGLGECEVTCSGFMEFVKMCGGRLSQLSIMEEVLI 418

  Fly   683 -DDT 685
             |:|
Zfish   419 PDNT 422

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5003NP_651593.1 F-box 69..111 CDD:425796
leucine-rich repeat 610..635 CDD:275381 7/24 (29%)
fbxl3lXP_693270.2 F-box_FBXL21 54..96 CDD:438950 11/50 (22%)
FBXL3_LRR-like 99..448 CDD:480268 78/450 (17%)
leucine-rich repeat 194..218 CDD:275381 6/45 (13%)
leucine-rich repeat 220..245 CDD:275381 4/24 (17%)
leucine-rich repeat 246..271 CDD:275381 3/24 (13%)
leucine-rich repeat 272..306 CDD:275381 8/108 (7%)
leucine-rich repeat 307..353 CDD:275381 8/49 (16%)
leucine-rich repeat 354..380 CDD:275381 6/31 (19%)
leucine-rich repeat 381..403 CDD:275381 8/26 (31%)
Blue background indicates that the domain is not in the aligned region.

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