Protein Alignment CG5003 and skp2

DIOPT Version :10

• Sequence 1: NP_651593.1
• Gene: CG5003 / 43344
• FlyBaseID: FBgn0039554
• Length: 713
• Species: Drosophila melanogaster
• Sequence 2: XP_068072015.2
• Gene: skp2 / 563708
• ZFINID: ZDB-GENE-030219-158
• Length: 510
• Species: Danio rerio
• Alignment Length: 318
• Identity: 76/318 - (23%)
• Similarity: 122/318 - (38%)
• Gaps: 78/318 - (24%)

  Fly    40 IPTEEEP-EIKQR-----------KREKEHKESL---------DRETECNLMDFC-----DELLF 78
            :.||..| |:.|:           .:.||::|:|         .||:..||   |     ||||.
Zfish   136 LDTENTPNELIQQWSPPHKKALTTAKGKENEENLFVLARRPRKRRESSANL---CWDSLPDELLL 197

  Fly    79 EIFQYLDTSSILAVMHCSPRFENLLLDHRFYHHIDLSNGPLPMGILEEILGRATEKTHTIKIC-G 142
            .||..|....:|.......|:..|..|...:|.:||.........|.::|.....:......| |
Zfish   198 GIFSRLSLQDLLRTSRVCKRWHRLAFDESLWHSVDLVGKAQLDAELGQVLSAGVLRLRCPHTCIG 262

  Fly   143 PPS--------SQHVAGEFRQF---TQTLSSVFPRVVQLKVLELEGVSLDFEYIHITEFPATLRR 196
            .||        .||:  :|...   |..|..|..|...|:.|.|||:.|....|:.......:.|
Zfish   263 QPSFKSTPSLRVQHL--DFSNCTVETSVLEDVLSRCKHLQNLSLEGLVLSDNIIYSLAQNPEIIR 325

  Fly   197 LKLKDCSVRVGDTPKSIFYSIELHLLDLEDLSIEDNSW--FEPYYIMGL-SKLPS---------- 248
            |.|..||   |.:|:|:...:.. ...:|::::   ||  |...:|..: |.:||
Zfish   326 LNLCGCS---GFSPESLTEMLTA-CTRIEEMNV---SWCDFSNLHIQAIASNIPSSVSQLNISGY 383

  Fly   249 LRRLSLKGCQALCKFVPYGSMAARFGFQKLESLDLRQTPINNSD----LQCFSAIENL 302
            .:.|:::..:|:.|..|           .:..|||..:.:..:|    ||..|::.:|
Zfish   384 RQNLTMEDVKAIVKRCP-----------NITDLDLSDSVLVTTDSFPVLQQLSSLRHL 430

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG5003	NP_651593.1	F-box	69..111	CDD:425796	13/46 (28%)
		leucine-rich repeat	610..635	CDD:275381
skp2	XP_068072015.2	None