DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5003 and FBXL12

DIOPT Version :10

Sequence 1:NP_651593.1 Gene:CG5003 / 43344 FlyBaseID:FBgn0039554 Length:713 Species:Drosophila melanogaster
Sequence 2:XP_054177302.1 Gene:FBXL12 / 54850 HGNCID:13611 Length:343 Species:Homo sapiens


Alignment Length:206 Identity:48/206 - (23%)
Similarity:76/206 - (36%) Gaps:50/206 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    87 SSILAVMHCSPRFENLLLDHRF-------YHHIDLSN----GP-----LPMG------------I 123
            |...|.|..:....||:..|.|       ..|.|...    ||     ||.|            :
Human    11 SRFSATMSSNSSALNLVKPHFFEIGSACRRDHGDFGRTAGLGPARDLLLPPGTGPDPHLQMRPKV 75

  Fly   124 LEEILGR-ATEKTHTIKICGPPSSQHVAGEFRQFTQTLSSVFPRVVQLKVLELEGVSL---DFEY 184
            :..:|.| ...:.|::::.|...|...|.:       ||....|.:..|...|:.:.|   |...
Human    76 MWHLLRRYMASRLHSLRMGGYLFSGSQAPQ-------LSPALLRALGQKCPNLKRLCLHVADLSM 133

  Fly   185 IHITEFPATLRRLKLKDCSVRVGDTPK----SIFYSIELHLLDLEDLSIEDNSWFEPYYIMGLSK 245
            :.||..|:|||.|:|..|.:.:....|    ::...:|..:||....       |...::.||::
Human   134 VPITSLPSTLRTLELHSCEISMAWLHKQQDPTVLPLLECIVLDRVPA-------FRDEHLQGLTR 191

  Fly   246 LPSLRRLSLKG 256
            ..:||.|.|.|
Human   192 FRALRSLVLGG 202

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5003NP_651593.1 F-box 69..111 CDD:425796 7/30 (23%)
leucine-rich repeat 610..635 CDD:275381
FBXL12XP_054177302.1 leucine-rich repeat 195..220 CDD:275381 5/8 (63%)
leucine-rich repeat 221..246 CDD:275381
leucine-rich repeat 247..270 CDD:275381
leucine-rich repeat 301..336 CDD:275381
LRR <117..>308 CDD:443914 25/93 (27%)
leucine-rich repeat 121..142 CDD:275381 6/20 (30%)
leucine-rich repeat 170..194 CDD:275381 6/30 (20%)
Blue background indicates that the domain is not in the aligned region.

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