DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5003 and Fbxl17

DIOPT Version :9

Sequence 1:NP_651593.1 Gene:CG5003 / 43344 FlyBaseID:FBgn0039554 Length:713 Species:Drosophila melanogaster
Sequence 2:NP_056609.1 Gene:Fbxl17 / 50758 MGIID:1354704 Length:701 Species:Mus musculus


Alignment Length:374 Identity:74/374 - (19%)
Similarity:129/374 - (34%) Gaps:123/374 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 EQAELGSTCLAAPKRRFPDNE-RCGRELAAVPVQPVLPQIPTEEEPEIKQRKREKEHKESLDRET 65
            :|.|.|......|    |:|. .|.||             |..|.|:|.|               
Mouse   291 QQPESGDADCQEP----PENPCDCHRE-------------PPPEIPDINQ--------------- 323

  Fly    66 ECNLMDFCDELLFEIFQYLDTSS--ILAVMHCSPRFENLLLDHRFYHHIDLSNGPLPMGILEEIL 128
                  ....:|.:||..|..:.  :.|.:.|. .:.:|.||.:|:..:|||:   ...:.:|:|
Mouse   324 ------LPPSILLKIFSNLSLNERCLSASLVCK-YWRDLCLDFQFWKQLDLSS---RQQVTDELL 378

  Fly   129 GRATEKTHTI--------------KIC-----GPPSSQHVAGEFRQFTQT----LSSVFPRVVQL 170
            .:...::..|              .:|     .|...::.|...:|.:.|    ::|..|.:.::
Mouse   379 EKIASRSQNIIEINISDCRSLSDSGVCVLAFKCPGLLRYTAYRCKQLSDTSIIAVASHCPLLQKV 443

  Fly   171 KV-----LELEGVSLDFEYIHITEFPATLRRLK---LKDCSVRVGDTPKSIFYSIELHLLDLEDL 227
            .|     |..||         :.:..:..|.||   ...| .::.|....:   |....|.|:.:
Mouse   444 HVGNQDKLTDEG---------LKQLGSRCRELKDIHFGQC-YKISDEGMIV---IAKSCLKLQRI 495

  Fly   228 SIEDNSWFEPYYIMGLSK-LPSLRRLSLKGCQALCKFVPYGSMAARFGFQKLESLDLRQ-TPINN 290
            .:::|.......:...:: .|.|:.:...||....|.|.:.:.     .:.|.|||||. |.::|
Mouse   496 YMQENKLVTDQSVKAFAEHCPELQYVGFMGCSVTSKGVIHLTK-----LRNLSSLDLRHITELDN 555

  Fly   291 SDL-----------------------QCFSAI----ENLKELLLESPQI 312
            ..:                       :|...|    :|||||.|.|.:|
Mouse   556 ETVMEIVKRCKNLSSLNLCLNWIINDRCVEVIAKEGQNLKELYLVSCKI 604

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5003NP_651593.1 F-box 68..114 CDD:279040 10/47 (21%)
leucine-rich repeat 610..635 CDD:275381
Fbxl17NP_056609.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 73..93
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 227..250
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 279..321 12/46 (26%)
F-box-like 321..368 CDD:289689 13/68 (19%)
leucine-rich repeat 362..387 CDD:275381 5/27 (19%)
leucine-rich repeat 388..413 CDD:275381 2/24 (8%)
AMN1 411..573 CDD:187754 33/179 (18%)
leucine-rich repeat 414..439 CDD:275381 4/24 (17%)
leucine-rich repeat 440..465 CDD:275381 4/33 (12%)
leucine-rich repeat 466..491 CDD:275381 5/28 (18%)
leucine-rich repeat 492..517 CDD:275381 2/24 (8%)
leucine-rich repeat 545..567 CDD:275381 6/21 (29%)
leucine-rich repeat 568..593 CDD:275381 2/24 (8%)
leucine-rich repeat 594..618 CDD:275381 7/11 (64%)
leucine-rich repeat 619..644 CDD:275381
leucine-rich repeat 645..670 CDD:275381
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167843132
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR16134
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.940

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