DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5003 and CG14891

DIOPT Version :10

Sequence 1:NP_651593.1 Gene:CG5003 / 43344 FlyBaseID:FBgn0039554 Length:713 Species:Drosophila melanogaster
Sequence 2:NP_650560.1 Gene:CG14891 / 42013 FlyBaseID:FBgn0038445 Length:495 Species:Drosophila melanogaster


Alignment Length:381 Identity:82/381 - (21%)
Similarity:139/381 - (36%) Gaps:114/381 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    74 DELLFEIFQYLDTSSILAVMHCSPRFENL--LLDHRFYHHIDLSN-GPLPMGILEEILGRATEKT 135
            |::.:::..||..:..|.......||:.:  |..||..|.:::.: ..|...:::.::..:.:..
  Fly   118 DDIWWKVLDYLSLNERLNFAASCERFQAIYELDSHRINHVLNMKDVCTLTHRVIKRLMLLSGKHI 182

  Fly   136 HTIKICGP--PSSQHVAGEFRQFTQTLSSVFPRVVQLKVLELEGVSLD-----FE----YIHITE 189
            |.: ..||  |:..::.    :|.|.|....|.:.:|...:: .|||.     |:    .|:||.
  Fly   183 HCV-TGGPLHPNWPYLT----EFVQLLGVSCPNLTELSFFKI-SVSLAHMTHLFDGANGLINITN 241

  Fly   190 FPATLRRLKLKDCSVRV-------------------GDTPKSIFYSIE-LHLLDLEDLSIEDNSW 234
            .  :|||..|||..:..                   ||:.||:..|:| |::....|||      
  Fly   242 I--SLRRCNLKDAHIYCLQMLSKLKSLDIRENFSIKGDSLKSLPISLEILNVSGCVDLS------ 298

  Fly   235 FEPYYIMGLSKLPSLRRLSLKGCQALCKFVP----YGSMA-----------ARF-------GFQK 277
              |..::.|:.|..||.|.   |..:.||..    ||.:|           ..|       |..:
  Fly   299 --PKCLIQLAALSHLRELR---CPGIVKFAKDNELYGRLAHYCPMLEVLELTDFMNVIQLGGLSR 358

  Fly   278 L------------------------ESLDLRQTPINNS---------DLQCFSAIENLKELLLES 309
            |                        ||..||...|.:|         ||..||.::.|:.|:|.:
  Fly   359 LHTLVIHSSAQLDYHVNNVLLTSIAESYSLRHLEILDSFGPMSDTSFDLSIFSQLKELRTLILHN 423

  Fly   310 PQILHSKQAVAKKNTNGNATDEAASPQPDSLKVLSDDEPSTSRAAMEHLRACKVAF 365
            ...........:|.:.....|.:.||.      ||::..:....::..||..||.|
  Fly   424 QNFTTLHLMGLQKLSTLEFLDLSGSPN------LSNEVVAKLTKSLSGLRRLKVDF 473

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5003NP_651593.1 F-box 69..111 CDD:425796 9/38 (24%)
leucine-rich repeat 610..635 CDD:275381
CG14891NP_650560.1 RRM 41..92 CDD:214636
leucine-rich repeat 211..237 CDD:275381 5/26 (19%)
LRR <235..>463 CDD:443914 53/246 (22%)
leucine-rich repeat 239..262 CDD:275381 8/24 (33%)
leucine-rich repeat 263..285 CDD:275381 4/21 (19%)
leucine-rich repeat 286..338 CDD:275381 17/62 (27%)
leucine-rich repeat 339..387 CDD:275381 5/47 (11%)
leucine-rich repeat 388..415 CDD:275381 8/26 (31%)
leucine-rich repeat 416..439 CDD:275381 4/22 (18%)
leucine-rich repeat 440..465 CDD:275381 5/30 (17%)
Blue background indicates that the domain is not in the aligned region.

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