DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5003 and CG14891

DIOPT Version :9

Sequence 1:NP_651593.1 Gene:CG5003 / 43344 FlyBaseID:FBgn0039554 Length:713 Species:Drosophila melanogaster
Sequence 2:NP_650560.1 Gene:CG14891 / 42013 FlyBaseID:FBgn0038445 Length:495 Species:Drosophila melanogaster


Alignment Length:381 Identity:82/381 - (21%)
Similarity:139/381 - (36%) Gaps:114/381 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    74 DELLFEIFQYLDTSSILAVMHCSPRFENL--LLDHRFYHHIDLSN-GPLPMGILEEILGRATEKT 135
            |::.:::..||..:..|.......||:.:  |..||..|.:::.: ..|...:::.::..:.:..
  Fly   118 DDIWWKVLDYLSLNERLNFAASCERFQAIYELDSHRINHVLNMKDVCTLTHRVIKRLMLLSGKHI 182

  Fly   136 HTIKICGP--PSSQHVAGEFRQFTQTLSSVFPRVVQLKVLELEGVSLD-----FE----YIHITE 189
            |.: ..||  |:..::.    :|.|.|....|.:.:|...:: .|||.     |:    .|:||.
  Fly   183 HCV-TGGPLHPNWPYLT----EFVQLLGVSCPNLTELSFFKI-SVSLAHMTHLFDGANGLINITN 241

  Fly   190 FPATLRRLKLKDCSVRV-------------------GDTPKSIFYSIE-LHLLDLEDLSIEDNSW 234
            .  :|||..|||..:..                   ||:.||:..|:| |::....|||      
  Fly   242 I--SLRRCNLKDAHIYCLQMLSKLKSLDIRENFSIKGDSLKSLPISLEILNVSGCVDLS------ 298

  Fly   235 FEPYYIMGLSKLPSLRRLSLKGCQALCKFVP----YGSMA-----------ARF-------GFQK 277
              |..::.|:.|..||.|.   |..:.||..    ||.:|           ..|       |..:
  Fly   299 --PKCLIQLAALSHLRELR---CPGIVKFAKDNELYGRLAHYCPMLEVLELTDFMNVIQLGGLSR 358

  Fly   278 L------------------------ESLDLRQTPINNS---------DLQCFSAIENLKELLLES 309
            |                        ||..||...|.:|         ||..||.::.|:.|:|.:
  Fly   359 LHTLVIHSSAQLDYHVNNVLLTSIAESYSLRHLEILDSFGPMSDTSFDLSIFSQLKELRTLILHN 423

  Fly   310 PQILHSKQAVAKKNTNGNATDEAASPQPDSLKVLSDDEPSTSRAAMEHLRACKVAF 365
            ...........:|.:.....|.:.||.      ||::..:....::..||..||.|
  Fly   424 QNFTTLHLMGLQKLSTLEFLDLSGSPN------LSNEVVAKLTKSLSGLRRLKVDF 473

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5003NP_651593.1 F-box 68..114 CDD:279040 10/41 (24%)
leucine-rich repeat 610..635 CDD:275381
CG14891NP_650560.1 RRM_6 25..91 CDD:290958
AMN1 <199..352 CDD:187754 41/166 (25%)
leucine-rich repeat 211..237 CDD:275381 5/26 (19%)
leucine-rich repeat 239..262 CDD:275381 8/24 (33%)
leucine-rich repeat 263..285 CDD:275381 4/21 (19%)
leucine-rich repeat 286..338 CDD:275381 17/62 (27%)
leucine-rich repeat 339..387 CDD:275381 5/47 (11%)
leucine-rich repeat 388..415 CDD:275381 8/26 (31%)
leucine-rich repeat 416..439 CDD:275381 4/22 (18%)
leucine-rich repeat 440..465 CDD:275381 5/30 (17%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45457992
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1046098at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.940

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