DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5003 and Fbxl7

DIOPT Version :10

Sequence 1:NP_651593.1 Gene:CG5003 / 43344 FlyBaseID:FBgn0039554 Length:713 Species:Drosophila melanogaster
Sequence 2:NP_650512.1 Gene:Fbxl7 / 41935 FlyBaseID:FBgn0038385 Length:772 Species:Drosophila melanogaster


Alignment Length:640 Identity:143/640 - (22%)
Similarity:207/640 - (32%) Gaps:216/640 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    98 RFENLLLDHRFYHH-IDLSNGPLP---------------MGILEEILGRATEKTHTIKICGPPSS 146
            |..|.:.||  ||| ..||:.||.               :.:.|.:..|::.         |||.
  Fly    22 RNSNAVRDH--YHHPHPLSSSPLDPQAYKMMSRKSPNPGLEVAEALASRSST---------PPSD 75

  Fly   147 QHVAGEFRQFTQTLSSVFPRVVQLK--VLELEG-----VSLDFEY-IHIT-----------EFPA 192
            |..|..    |...::|. .:||.|  ..||.|     ......| .|.|           |.||
  Fly    76 QAGASS----TAAAAAVL-HMVQQKAATFELRGRHSRPTEQQTSYGAHSTASVGRHAKKSPELPA 135

  Fly   193 TLRRLKLKDCSVRVGDTPKSIFYSIELHLL---------------DLEDLSIEDNSWFEPYYIMG 242
            ...|      :|.....|:: |.::| |:|               |.||.|  ||:........|
  Fly   136 PASR------NVAPVPQPRN-FLTLE-HVLQFGTQRPSWMHGNSADTEDSS--DNNAGGGGAGSG 190

  Fly   243 LSKLPSLRRLSLKGCQALCKFVP-------YGSMAARFGF-QKLESL----DLRQTPINN----- 290
            .......||.....|.     ||       .|...|::.. :|:|||    .||..|:..     
  Fly   191 SGGAGGRRRAQGGRCS-----VPTVLSSNGSGGNGAQYLLDKKMESLYLGNALRTLPLGAEASQF 250

  Fly   291 -------SDLQCFSAIENLKELL----LESP-QILHSKQAVAKKNTNGNATDEAASPQPDSLKVL 343
                   .|....|..|.|.|.|    ..|| :...|.:.:..:::|.|..........|.|..|
  Fly   251 QNERYYLEDYSSGSGNERLPERLHHPRTSSPSETSGSDRYLLNRSSNSNHLHSKGQSLSDGLCNL 315

  Fly   344 SDDEPSTSRAAMEHLRACKVAFNLDNCSDRKEEKSPVPTEPPSEGQDLQAKRIRAPSESDDEDTS 408
            ....||..:.....:                   ||.||...|.|         ......:..|:
  Fly   316 GRFSPSLDQGYATLV-------------------SPSPTGHHSSG---------GAGNVTNSTTA 352

  Fly   409 STSGSSSDKLEVLSLPRNGHSNAAPLSGGVDLPPLPHAADAANAADAPIAVDAANIEAPGQSPGL 473
            |.:|..:..... :.||.|.|:.. |.||           ||:|...|    ..|.:.|.:...|
  Fly   353 SGAGIMASSTPT-TTPRRGASSNG-LGGG-----------AASAIGPP----PWNRKGPFRCGPL 400

  Fly   474 DPRPPRAYIYVPDAENANPRQQRSVVAVFA--QGTEQRYIYVNQQFSLPMNVLMPTRRHRTHPRP 536
            ..|       :||         .:||.:|:  ...|.            .||....||       
  Fly   401 FDR-------LPD---------EAVVRIFSWLDSCEL------------CNVARVCRR------- 430

  Fly   537 NYDQVVQHPMFWNML----EPLDRDYARRVRPRP---PSCQ-TTPQYYVTDRAMYSFG--RADRP 591
             ::.:...|:.|.::    |.|:.|...::..|.   .||. ..|:   .:|.|.:.|  .:|:.
  Fly   431 -FEHLAWRPILWKVISLRGEHLNGDKTLKMIFRQLCGQSCNGACPE---VERVMLADGCRISDKG 491

  Fly   592 VQPDVVWIRNINRSPDNKLERLSLRNYHLITNHTL-EHLVQCSPNLVYIDVSGTS 645
            :|      ....|.|:  |..|.|:....|||..| |.|.:|| ||.::||:|.|
  Fly   492 LQ------LLTRRCPE--LTHLQLQTCVDITNQALVEALTKCS-NLQHLDVTGCS 537

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5003NP_651593.1 F-box 69..111 CDD:425796 5/12 (42%)
leucine-rich repeat 610..635 CDD:275381 11/25 (44%)
Fbxl7NP_650512.1 leucine-rich repeat 502..521 CDD:275381 7/18 (39%)
leucine-rich repeat 528..555 CDD:275381 5/10 (50%)
leucine-rich repeat 556..581 CDD:275381
AMN1 577..746 CDD:187754
leucine-rich repeat 582..607 CDD:275381
leucine-rich repeat 608..633 CDD:275381
leucine-rich repeat 634..659 CDD:275381
leucine-rich repeat 660..685 CDD:275381
leucine-rich repeat 686..710 CDD:275381
leucine-rich repeat 711..735 CDD:275381
leucine-rich repeat 737..761 CDD:275381
dermokine <279..>394 CDD:455732 31/159 (19%)
F-box_SF 401..444 CDD:459239 13/78 (17%)
leucine-rich repeat 441..460 CDD:275381 4/18 (22%)
leucine-rich repeat 476..501 CDD:275381 6/30 (20%)
LRR <483..>640 CDD:443914 22/64 (34%)
Blue background indicates that the domain is not in the aligned region.

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