Sequence 1: | NP_651593.1 | Gene: | CG5003 / 43344 | FlyBaseID: | FBgn0039554 | Length: | 713 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_730815.2 | Gene: | Skp2 / 40548 | FlyBaseID: | FBgn0037236 | Length: | 559 | Species: | Drosophila melanogaster |
Alignment Length: | 257 | Identity: | 61/257 - (23%) |
---|---|---|---|
Similarity: | 104/257 - (40%) | Gaps: | 44/257 - (17%) |
- Green bases have known domain annotations that are detailed below.
Fly 74 DELLFEIFQYLDTSSILAVMHCSPRFENLLLDHRFYHHIDLSNGPLPMGILEEILGRATEKTHTI 138
Fly 139 KICGPPSSQHVAGEFRQFTQ-------------------TLSSVFPRVVQLKVLELEGVSLDFEY 184
Fly 185 IHITEFPATLRRLKLKDCSVRVGDTPKSIFYSIELHLLDLEDLSIEDNSWFE------PYYIMGL 243
Fly 244 SKLPSLRRLSLKGCQALCKFVPYGSMAARFGFQKLESLDLRQTPINNSDLQCFSAIENLKEL 305 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CG5003 | NP_651593.1 | F-box | 68..114 | CDD:279040 | 10/39 (26%) |
leucine-rich repeat | 610..635 | CDD:275381 | |||
Skp2 | NP_730815.2 | F-box-like | 239..284 | CDD:289689 | 10/39 (26%) |
leucine-rich repeat | 302..327 | CDD:275381 | 6/27 (22%) | ||
AMN1 | 309..480 | CDD:187754 | 41/185 (22%) | ||
leucine-rich repeat | 328..352 | CDD:275381 | 1/23 (4%) | ||
leucine-rich repeat | 353..376 | CDD:275381 | 8/25 (32%) | ||
leucine-rich repeat | 377..402 | CDD:275381 | 6/25 (24%) | ||
leucine-rich repeat | 403..428 | CDD:275381 | 6/29 (21%) | ||
leucine-rich repeat | 429..455 | CDD:275381 | 8/29 (28%) | ||
leucine-rich repeat | 456..480 | CDD:275381 | 5/23 (22%) | ||
leucine-rich repeat | 481..500 | CDD:275381 | 1/1 (100%) | ||
leucine-rich repeat | 506..529 | CDD:275381 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C45457993 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | P | PTHR16134 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.940 |