DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5003 and CG32085

DIOPT Version :10

Sequence 1:NP_651593.1 Gene:CG5003 / 43344 FlyBaseID:FBgn0039554 Length:713 Species:Drosophila melanogaster
Sequence 2:NP_729732.1 Gene:CG32085 / 39311 FlyBaseID:FBgn0052085 Length:666 Species:Drosophila melanogaster


Alignment Length:311 Identity:69/311 - (22%)
Similarity:102/311 - (32%) Gaps:106/311 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    74 DELLFEIFQYLD--TSSILA--------VMHCSPRFENLLLD----------------------- 105
            |..|...|||..  ...|||        .::.|||:.:.||.                       
  Fly   287 DRFLSRFFQYFSPYERRILAQVCIKWRDTLYRSPRYWSGLLPTLQCRELRQMPGCDRGKLYNSLI 351

  Fly   106 HRFYHHIDLSNGPLPMGILEEILGRATEKTHTIKICGPPSSQHVAGEFRQFTQTLSSVFPRVVQ- 169
            .|.:|.:.|      :|..:|   .|.:..|:.    |.:|:||    ...:...||:..|.:: 
  Fly   352 RRGFHALGL------VGASDE---DALDVVHSF----PLASKHV----HSLSLRCSSISDRGLET 399

  Fly   170 -------LKVLELEGVSLDFEYIHITE------FPATLRRLKLKDCSVRVGDTPKSI-------F 214
                   |..|||.|.:      .:||      ....:..|.|.|| :.:.|.....       .
  Fly   400 LLDHLQSLFELELAGCN------EVTEAGLWACLTPRIVSLSLADC-INIADEAVGAVAQLLPSL 457

  Fly   215 YSIELHLLDLEDLSIEDNSWFEPYYIMGLS--------------------KLPSLRRLSLKGCQA 259
            |...|....:.|.::   .:|.|.....||                    .||.|..|||.||. 
  Fly   458 YEFSLQAYHVTDAAL---GYFSPKQSHSLSILRLQSCWELTNHGIVNIVHSLPHLTVLSLSGCS- 518

  Fly   260 LCKFVPYGSMAARFGFQKLESLDLRQTP-INNSDLQCFSA-IENLKELLLE 308
              |....|........|||.:|||...| |.::.|:..:. :..|:||.|:
  Fly   519 --KLTDDGVELIAENLQKLRALDLSWCPRITDASLEYIACDLNQLEELTLD 567

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5003NP_651593.1 F-box 69..111 CDD:425796 14/69 (20%)
leucine-rich repeat 610..635 CDD:275381
CG32085NP_729732.1 F-box_FBXL16 283..325 CDD:438899 11/37 (30%)
leucine-rich repeat 382..406 CDD:275381 4/27 (15%)
AMN1 383..600 CDD:187754 45/198 (23%)
leucine-rich repeat 431..456 CDD:275381 5/25 (20%)
leucine-rich repeat 457..482 CDD:275381 5/27 (19%)
leucine-rich repeat 483..508 CDD:275381 3/24 (13%)
leucine-rich repeat 509..534 CDD:275381 8/27 (30%)
leucine-rich repeat 535..560 CDD:275381 7/24 (29%)
leucine-rich repeat 561..585 CDD:275381 4/7 (57%)
leucine-rich repeat 586..610 CDD:275381
leucine-rich repeat 636..661 CDD:275381
Blue background indicates that the domain is not in the aligned region.

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