DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5003 and Fbxl7

DIOPT Version :10

Sequence 1:NP_651593.1 Gene:CG5003 / 43344 FlyBaseID:FBgn0039554 Length:713 Species:Drosophila melanogaster
Sequence 2:NP_001102015.1 Gene:Fbxl7 / 361907 RGDID:1305813 Length:491 Species:Rattus norvegicus


Alignment Length:440 Identity:90/440 - (20%)
Similarity:160/440 - (36%) Gaps:144/440 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 GRELAAVPVQPVLPQIPTE-EEPEIKQRKREKEHKESLDRETECNLMDFCDELLFEIFQYLDTSS 88
            |..:|.|...|     ||. ..|.|:...|.::.:.|:||        ..|..:.:||.:|.|:.
  Rat    82 GETVAMVHSPP-----PTRLTHPLIRLASRPQKEQASIDR--------LPDHSMVQIFSFLPTNQ 133

  Fly    89 ILAVMHCSPRFENLLLDHRFYHHIDLSNGPLPMG-------------------ILEEIL----GR 130
            :........|:.||..|.|.:..|.|:...:.:.                   :||.::    .|
  Rat   134 LCRCARVCRRWYNLAWDPRLWRTIRLTGETINVDRALKVLTRRLCQDTPNVCLMLETVIVSGCRR 198

  Fly   131 ATEK-THTIKICGP-------------------------PSSQH--VAGEFRQFTQTLSSVFPRV 167
            .|:: .:||..|.|                         |:.:|  |:|..:....:|:    |.
  Rat   199 LTDRGLYTIAQCCPELRRLEVSGCYNISNEAVFDVVSLCPNLEHLDVSGCSKVTCISLT----RE 259

  Fly   168 VQLKVLELEGVSLDFEYIHITE--------------FPATLRRLKLKDCSVRVGDTPKSIFYSIE 218
            ..:|:..|.|..:...|:.:|:              ....|..|.|:.| ||:  |.:.:.|.: 
  Rat   260 ASIKLSPLHGKQISIRYLDMTDCFVLEDEGLHTIAAHCTQLTHLYLRRC-VRL--TDEGLRYLV- 320

  Fly   219 LHLLDLEDLSIEDNSWFEPYYIMGLSKLPS---------------------------LRRLSLKG 256
            ::...:::||:.|..:...:.:..::||.|                           ||.|:.:|
  Rat   321 IYCTSIKELSVSDCRFVSDFGLREIAKLESRLRYLSIAHCGRITDVGIRYVAKYCSKLRYLNARG 385

  Fly   257 CQALCKFVPYGSMAARFGFQKLESLDLRQTP------INNSDLQCFSAIENLKELLLESPQILHS 315
            |:.:   ..:|.........||:|||:.:.|      :.:..|.||    |||.|.|:|.:.:..
  Rat   386 CEGI---TDHGVEYLAKNCTKLKSLDIGKCPLVSDTGLESLALNCF----NLKRLSLKSCESITG 443

  Fly   316 K--QAVAKKNTNGNATDEAASPQPDSLKVLSDDEPSTSRAAMEHL-RACK 362
            :  |.||     .|..|         |::|:..:...|..|:..: |.||
  Rat   444 QGLQIVA-----ANCFD---------LQMLNVQDCEVSVEALRFVKRHCK 479

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5003NP_651593.1 F-box 69..111 CDD:425796 10/41 (24%)
leucine-rich repeat 610..635 CDD:275381
Fbxl7NP_001102015.1 F-box_FBXL7 114..157 CDD:438892 12/50 (24%)
leucine-rich repeat 129..151 CDD:275381 5/21 (24%)
leucine-rich repeat 154..187 CDD:275381 2/32 (6%)
AMN1 <185..366 CDD:187754 33/188 (18%)
leucine-rich repeat 188..213 CDD:275381 7/24 (29%)
leucine-rich repeat 214..234 CDD:275381 0/19 (0%)
leucine-rich repeat 240..273 CDD:275381 8/36 (22%)
leucine-rich repeat 274..299 CDD:275381 2/24 (8%)
AMN1 297..464 CDD:187754 42/191 (22%)
leucine-rich repeat 300..325 CDD:275381 8/28 (29%)
leucine-rich repeat 326..351 CDD:275381 5/24 (21%)
leucine-rich repeat 352..377 CDD:275381 0/24 (0%)
leucine-rich repeat 378..403 CDD:275381 6/27 (22%)
leucine-rich repeat 404..429 CDD:275381 8/28 (29%)
leucine-rich repeat 430..453 CDD:275381 8/27 (30%)
leucine-rich repeat 456..480 CDD:275381 7/24 (29%)
Blue background indicates that the domain is not in the aligned region.

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