DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5003 and fbxl14a

DIOPT Version :10

Sequence 1:NP_651593.1 Gene:CG5003 / 43344 FlyBaseID:FBgn0039554 Length:713 Species:Drosophila melanogaster
Sequence 2:NP_958890.1 Gene:fbxl14a / 333988 ZFINID:ZDB-GENE-030131-5920 Length:411 Species:Danio rerio


Alignment Length:189 Identity:47/189 - (24%)
Similarity:83/189 - (43%) Gaps:54/189 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   160 LSSVFPRVVQL--KVLELEGVS---------LDFEY-----------IHITE-----FPATLRR- 196
            :||:||.::.:  ..|:::|..         .|..|           :|:..     ||:...| 
Zfish     5 ISSLFPEILAMIFNYLDVKGKGRVAQVCTAWRDASYHKSVWRGVEAKLHLRRANPSLFPSLQTRG 69

  Fly   197 -LKLKDCSVRVGDTPKSIFYSIELHLLDLEDLSIE------DNSWFEPYYIMGLSKLPSLRRLSL 254
             .|::..|:|     :|:.|.|: .:.::|.|::.      ||.....:    :..:||||.|:|
Zfish    70 IKKVQILSLR-----RSLSYVIQ-GMPNIESLNLSGCYNLTDNGLGHAF----VQDIPSLRILNL 124

  Fly   255 KGCQALCKFVPYGSMA--ARFGFQKLESLDLRQ-TPINNSDLQCFS-AIENLKELLLES 309
                :|||.:...|:.  |:: .:.||.|||.. :.|.|:.|...: .:.|||.|.|.|
Zfish   125 ----SLCKQITDSSLGRIAQY-LKNLELLDLGGCSNITNTGLLLIAWGLHNLKSLNLRS 178

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5003NP_651593.1 F-box 69..111 CDD:425796
leucine-rich repeat 610..635 CDD:275381
fbxl14aNP_958890.1 F-box_FBXL14 6..46 CDD:438897 8/39 (21%)
AMN1 90..243 CDD:187754 29/98 (30%)
leucine-rich repeat 92..118 CDD:275381 4/29 (14%)
leucine-rich repeat 119..144 CDD:275381 9/29 (31%)
leucine-rich repeat 145..170 CDD:275381 8/24 (33%)
leucine-rich repeat 171..203 CDD:275381 5/8 (63%)
leucine-rich repeat 204..229 CDD:275381
AMN1 230..397 CDD:187754
leucine-rich repeat 230..254 CDD:275381
leucine-rich repeat 255..280 CDD:275381
leucine-rich repeat 281..304 CDD:275381
leucine-rich repeat 307..331 CDD:275381
leucine-rich repeat 332..357 CDD:275381
leucine-rich repeat 358..377 CDD:275381
Blue background indicates that the domain is not in the aligned region.

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