DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5003 and Fbxl21

DIOPT Version :10

Sequence 1:NP_651593.1 Gene:CG5003 / 43344 FlyBaseID:FBgn0039554 Length:713 Species:Drosophila melanogaster
Sequence 2:XP_038951543.1 Gene:Fbxl21 / 306750 RGDID:1305555 Length:460 Species:Rattus norvegicus


Alignment Length:538 Identity:101/538 - (18%)
Similarity:169/538 - (31%) Gaps:183/538 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   193 TLRRLKLKDCSVRVGDTPKSIFYSI--ELHLLDLEDLSIEDNSWFEPYYIMGLSKLPSLRRLSLK 255
            :||:.::....:..|..|..:...|  .|.|:|....|....||.|.::|      |.|.|    
  Rat    55 SLRQTQMLSALLDWGTLPHHVILRIFQYLPLVDRARASSVCRSWNEVFHI------PDLWR---- 109

  Fly   256 GCQALCKFVPYGSMAARFGFQKLESLDLRQTPINNSDLQCFSAIENLKELLLESPQILHSKQAVA 320
                            :|.|:           :|.|....|.:..         |.::   |.:.
  Rat   110 ----------------KFEFE-----------LNQSATSYFKSTH---------PDLI---QQII 135

  Fly   321 KKNTNGNATDEAASPQPDSLKVLSDDEPSTSRAAMEHLRACKVAFNLDNCSDRKEEKSPVPTEPP 385
            ||:        ||..|..|.||.|..|.:.:        ||.:...|.|||  .:....:.|..|
  Rat   136 KKH--------AAHLQYVSFKVDSSTESAEA--------ACHILSQLVNCS--IQTLGLISTAKP 182

  Fly   386 S------------------EGQDLQAKRIRAPSESDDEDTSSTSGSSSDKLEVLSLPRNGHSNAA 432
            |                  ..:.|.:.:|. .:..||........::||.|.:|.          
  Rat   183 SFMNMPKSHFVSALTVVFVNSKSLSSIKIE-DTPVDDPSLKILVANNSDTLRLLK---------- 236

  Fly   433 PLSGGVDLPPLPHAADAANAADAPIAVDAANIEAPGQSPGLDPRPPRAYIYVPDAENANPRQQRS 497
                   :...||.     ::|..:.|       .....||.......||.             |
  Rat   237 -------MSSCPHV-----SSDGILCV-------ADHCQGLRELALNYYIL-------------S 269

  Fly   498 VVAVFAQGTEQRYIYVNQQFSLPMNVLMPTR---RHRTHPRPNYDQVVQHPMFWNMLEPLDRDYA 559
            ...:.|..:|   .:||.: .|.::|:....   :..:..:|::|.:|:|               
  Rat   270 DELLLALSSE---THVNLE-HLRIDVVSENPGQIKFHSIKKPSWDALVKH--------------- 315

  Fly   560 RRVRPRPPSCQTTPQYYVTDRAMYSFGRADRPVQPDVVWIRNINRSPDNKLERLSLRNYHLITNH 624
                  .|.......:::.:....:|.:.:.|| ..:.:.|:::|:   .|.|:.|....||   
  Rat   316 ------SPGVNVVMYFFLYEEEFDTFFKEETPV-THLYFGRSVSRT---ILGRIGLNCPRLI--- 367

  Fly   625 TLEHLVQCSPNLVYIDVSGTSITLPAIRRFKISKPKCEVVANHLEEF-----ERLPELETQEEDD 684
               .||.|:..|..:|.....|.........:...:|||..:...||     .||.:|...||  
  Rat   368 ---ELVVCANGLQPLDSELIRIAEHCKNLTALGLSECEVSCSAFVEFVRLCGRRLTQLSLMEE-- 427

  Fly   685 TVVVMLQPPPRADDEQPP 702
                :|.|    ||...|
  Rat   428 ----VLVP----DDRYTP 437

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5003NP_651593.1 F-box 69..111 CDD:425796
leucine-rich repeat 610..635 CDD:275381 8/24 (33%)
Fbxl21XP_038951543.1 F-box_SF 66..108 CDD:459239 12/47 (26%)
FBXL21_LRR 111..460 CDD:467831 85/456 (19%)
leucine-rich repeat 206..231 CDD:275381 5/25 (20%)
leucine-rich repeat 232..257 CDD:275381 6/53 (11%)
leucine-rich repeat 258..283 CDD:275381 6/40 (15%)
leucine-rich repeat 284..318 CDD:275381 6/55 (11%)
leucine-rich repeat 329..365 CDD:275381 8/39 (21%)
leucine-rich repeat 366..392 CDD:275381 8/31 (26%)
leucine-rich repeat 393..418 CDD:275381 5/24 (21%)
Blue background indicates that the domain is not in the aligned region.

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