DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment CG5003 and Amn1

DIOPT Version :9

Sequence 1:	NP_651593.1	Gene:	CG5003 / 43344	FlyBaseID:	FBgn0039554	Length:	713	Species:	Drosophila melanogaster
Sequence 2:	NP_001008334.2	Gene:	Amn1 / 302032	RGDID:	1308119	Length:	258	Species:	Rattus norvegicus

Alignment Length:	118	Identity:	29/118 - (24%)
Similarity:	48/118 - (40%)	Gaps:	14/118 - (11%)

- Green bases have known domain annotations that are detailed below.

  Fly   170 LKVLELEGVSLDF---EYIHITEFPATLRRLKLKDCSVRVGDTP-KSIFYSIELHLLDLEDLSIE 230
            :|::.:.|...|.   |.:|     ..::||.|:.|:  :.|.. :.:....:|..|:|:.....
  Rat    41 IKIMSMRGRITDSNINEVLH-----PEVQRLDLRSCN--ISDVALQHLCKCRKLKALNLKSCREH 98

  Fly   231 DNSWFEPYYIMGLSKLPSLRRLSLKGCQALCKFVPYGSMAARFGFQKLESLDL 283
            .||..........|....|..:|||||   |.....|.:|.....|.|:.:||
  Rat    99 RNSITSEGIKAVASSCSDLHEISLKGC---CSVTDEGVLALALNCQLLKIIDL 148

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
CG5003	NP_651593.1	F-box	68..114	CDD:279040
CG5003	NP_651593.1	leucine-rich repeat	610..635	CDD:275381
Amn1	NP_001008334.2	leucine-rich repeat	10..35	CDD:275381
		leucine-rich repeat	36..58	CDD:275381	3/16 (19%)
		AMN1	37..257	CDD:187754	29/118 (25%)
		leucine-rich repeat	63..86	CDD:275381	5/24 (21%)
		leucine-rich repeat	87..116	CDD:275381	6/28 (21%)
		leucine-rich repeat	117..142	CDD:275381	9/27 (33%)
		leucine-rich repeat	143..168	CDD:275381	3/6 (50%)
		leucine-rich repeat	169..195	CDD:275381
		leucine-rich repeat	196..221	CDD:275381
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1046098at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	1.010