| Sequence 1: | NP_651593.1 | Gene: | CG5003 / 43344 | FlyBaseID: | FBgn0039554 | Length: | 713 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_001099886.1 | Gene: | Skp2 / 294790 | RGDID: | 1562456 | Length: | 423 | Species: | Rattus norvegicus |
| Alignment Length: | 301 | Identity: | 69/301 - (22%) |
|---|---|---|---|
| Similarity: | 104/301 - (34%) | Gaps: | 66/301 - (21%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 46 PEIKQRKREKEHKESLD----RETECNLMDF--------CDELLFEIFQYLDTSSILAVMHCSPR 98
Fly 99 FENLLLDHRFYHHIDLSNGPLPMGILEEILGRATEKTHTIKICGPPS--SQHVAGEFRQF----- 156
Fly 157 --------TQTLSSVFPRVVQLKVLELEGVSLDFEYIHITEFPATLRRLKLKDCSVRVGDTPKSI 213
Fly 214 FYSIELHLLDLEDLSIEDNSW----FEPYYIMGLSKLP-SLRRLSLKGCQA------LCKFV--- 264
Fly 265 PYGSMAARFGFQKLESLDLRQTPINNSDLQCFSAIENLKEL 305 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| CG5003 | NP_651593.1 | F-box | 69..111 | CDD:425796 | 14/49 (29%) |
| leucine-rich repeat | 610..635 | CDD:275381 | |||
| Skp2 | NP_001099886.1 | F-box_FBXL1 | 97..137 | CDD:438886 | 13/39 (33%) |
| leucine-rich repeat | 137..167 | CDD:275381 | 5/34 (15%) | ||
| leucine-rich repeat | 183..207 | CDD:275381 | 1/23 (4%) | ||
| AMN1 | 193..>345 | CDD:187754 | 37/165 (22%) | ||
| leucine-rich repeat | 208..231 | CDD:275381 | 6/22 (27%) | ||
| leucine-rich repeat | 232..257 | CDD:275381 | 7/28 (25%) | ||
| leucine-rich repeat | 258..283 | CDD:275381 | 6/27 (22%) | ||
| leucine-rich repeat | 285..311 | CDD:275381 | 7/36 (19%) | ||
| leucine-rich repeat | 312..336 | CDD:275381 | 8/25 (32%) | ||
| leucine-rich repeat | 337..356 | CDD:275381 | 1/1 (100%) | ||
| Blue background indicates that the domain is not in the aligned region. | |||||