DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5003 and Fbxl9

DIOPT Version :10

Sequence 1:NP_651593.1 Gene:CG5003 / 43344 FlyBaseID:FBgn0039554 Length:713 Species:Drosophila melanogaster
Sequence 2:NP_001355337.1 Gene:Fbxl9 / 234684 MGIID:2443262 Length:621 Species:Mus musculus


Alignment Length:432 Identity:91/432 - (21%)
Similarity:143/432 - (33%) Gaps:123/432 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    94 HCSPRFENLLLDHRFYHHIDLSNGPLPMGILEEILGRATEKTHTIKICGPPSSQHVAGEFRQFTQ 158
            |..|..|:|.|.         ...|.....|..|||....:|..:..|   :|...:|......:
Mouse    91 HLGPHLESLCLG---------GGSPTEASFLALILGCPVLRTLDLSGC---NSLFTSGTLLAQPE 143

  Fly   159 TLSSVFPRVVQLKVLELEGVS--LDFEYIHITEFPATLRRLKLKDC-------------SVRVGD 208
            |...|...:..|:.|.|.|:.  .|..:.|::....:|.||.|..|             |.:|..
Mouse   144 TAQCVREALSGLRDLNLAGLRDLTDLSFNHLSSCFPSLERLSLAYCHLSFELSPTWGSISPQVSS 208

  Fly   209 TPKSIFYSI---------ELHLLDLEDLSIEDNSW----------FEPYYIMGLSKL-------- 246
            ..:..|:::         .|..|||....:...:.          .|..|:.....|        
Mouse   209 PSQLSFHNLLKFIKERAGTLRALDLSGTGLPPEALQALGQVTGLKLEELYLHSCRDLSSEAVTIL 273

  Fly   247 ----PSLRRLSLKGCQALCKFVPYGS-MAARFGFQKLESLDLRQTP-INNSDLQCFSAIENLKEL 305
                |.|..|.|.||..|..    |: :|...|.:.|..|.|::.. :.::......|:..|:.|
Mouse   274 CRQQPGLTSLDLSGCSDLTD----GALLAVSRGLRHLRHLSLKKLQRLTDAGCAALGALRELQSL 334

  Fly   306 LL---------ESPQILHSKQAVAK-------------KNTNGNATDEAASPQPDSLKVLSDDEP 348
            .:         |..|:|.|.:...:             |:.:..:...|..|   |||||  |..
Mouse   335 DMAECCLVSGRELAQVLGSVRRAPRALTSLRLAYCSSLKDASVLSMIPALGP---SLKVL--DLS 394

  Fly   349 S-------TSRAA---MEHLRACKVAF----------NLDNCSD----------RKEEKSPVPTE 383
            |       |.:|.   :.||...::|:          .|...||          :.:.::|.|.|
Mouse   395 SCMALTNQTMQAICTYLIHLSVLRLAWCKELQDWGLLGLKEPSDEPVLSPQLHQKVDNEAPDPQE 459

  Fly   384 PPSEGQDLQAKRIRAPSESDDEDTSSTSGSSSDKLEVLSLPR 425
            |.||.|......::|..|.|....|..:.:|..|  ||..|:
Mouse   460 PSSEPQGSSLLMLQALQELDLTACSKLTDASLAK--VLQFPQ 499

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5003NP_651593.1 F-box 69..111 CDD:425796 5/16 (31%)
leucine-rich repeat 610..635 CDD:275381
Fbxl9NP_001355337.1 F-box_SF 2..>33 CDD:459239
leucine-rich repeat 70..83 CDD:275381
PPP1R42 <118..360 CDD:455733 47/248 (19%)
leucine-rich repeat 121..154 CDD:275381 6/35 (17%)
leucine-rich repeat 155..180 CDD:275381 6/24 (25%)
leucine-rich repeat 181..227 CDD:275381 8/45 (18%)
leucine-rich repeat 228..248 CDD:275381 4/19 (21%)
AMN1 240..428 CDD:187754 38/196 (19%)
leucine-rich repeat 254..277 CDD:275381 3/22 (14%)
leucine-rich repeat 280..305 CDD:275381 9/28 (32%)
leucine-rich repeat 306..360 CDD:275381 10/53 (19%)
leucine-rich repeat 331..356 CDD:275381 6/24 (25%)
leucine-rich repeat 361..387 CDD:275381 3/28 (11%)
leucine-rich repeat 388..413 CDD:275381 8/26 (31%)
leucine-rich repeat 414..474 CDD:275381 12/59 (20%)
AMN1 <475..589 CDD:187754 8/27 (30%)
leucine-rich repeat 475..525 CDD:275381 8/27 (30%)
leucine-rich repeat 526..551 CDD:275381
leucine-rich repeat 552..577 CDD:275381
leucine-rich repeat 578..603 CDD:275381
Blue background indicates that the domain is not in the aligned region.

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