DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5003 and B0564.6

DIOPT Version :9

Sequence 1:NP_651593.1 Gene:CG5003 / 43344 FlyBaseID:FBgn0039554 Length:713 Species:Drosophila melanogaster
Sequence 2:NP_502527.1 Gene:B0564.6 / 182046 WormBaseID:WBGene00007206 Length:423 Species:Caenorhabditis elegans


Alignment Length:323 Identity:72/323 - (22%)
Similarity:108/323 - (33%) Gaps:114/323 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   123 ILEEILGRATEKTHTIKI------CGPPSSQHVAGEFRQF--------------TQTLSSV-FPR 166
            |:.:..|...:|...::.      |...|..||..:..||              :.|::|: |.:
 Worm   151 IIRKSFGTLLKKCRKLRYFEISGQCLMNSHFHVDPKILQFISNTVEHLAIAVGHSLTINSLAFLK 215

  Fly   167 VVQLKVLELEGVSL---DFEYIHITEFPATLRRLKLKDCSVRVGDTPKSIFYSIELHLLDLEDLS 228
            ..:||.|.|:...:   |.|:|                  |.:.||...:..|..::|||...  
 Worm   216 DKRLKTLNLQRSFISPCDLEHI------------------VAMADTITHLDLSRSVNLLDCRQ-- 260

  Fly   229 IEDNSWFEPYYIMGLSKLPSLRRLSLK---------GCQALCKFVPYGSMAARFGFQKLESLDL- 283
                          :::|.:||.||||         ..|.:.|           ...|||.|.| 
 Worm   261 --------------IAELVNLRHLSLKNNKEGVRDDSLQLIIK-----------NCSKLEELSLD 300

  Fly   284 --RQTPINNSDLQCFSAIENLKELLLESPQILHSKQAVAKK----------NTN--------GNA 328
              ....:|:  |.....:.|||:|.|  |.|::...:|..:          |.|        |..
 Worm   301 CCEYLTVNS--LITLGNLNNLKQLSL--PGIVNVDDSVCLQISRCSKLTYLNINFCRRVQKRGLL 361

  Fly   329 TDEAASPQPDSLKVLSDDEPSTSRAAMEHLRACKVAFNLDNCSDRKEEKS----PVPTE-PPS 386
            ...:.....|.|:||.      .||...||.|..:.|.....||..|..|    |:|.. |||
 Worm   362 CLLSCLTSLDHLEVLG------IRAYSHHLLALHINFPKTIVSDYVESISIIIPPIPPPIPPS 418

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5003NP_651593.1 F-box 68..114 CDD:279040
leucine-rich repeat 610..635 CDD:275381
B0564.6NP_502527.1 leucine-rich repeat 106..130 CDD:275381
leucine-rich repeat 131..159 CDD:275381 2/7 (29%)
leucine-rich repeat 166..193 CDD:275381 6/26 (23%)
leucine-rich repeat 195..214 CDD:275381 2/18 (11%)
leucine-rich repeat 219..243 CDD:275381 8/41 (20%)
leucine-rich repeat 244..266 CDD:275381 5/37 (14%)
leucine-rich repeat 267..293 CDD:275381 8/36 (22%)
leucine-rich repeat 294..318 CDD:275381 6/25 (24%)
leucine-rich repeat 319..343 CDD:275381 7/25 (28%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160166933
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.930

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