DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5003 and FBXL14

DIOPT Version :10

Sequence 1:NP_651593.1 Gene:CG5003 / 43344 FlyBaseID:FBgn0039554 Length:713 Species:Drosophila melanogaster
Sequence 2:NP_689654.1 Gene:FBXL14 / 144699 HGNCID:28624 Length:418 Species:Homo sapiens


Alignment Length:220 Identity:48/220 - (21%)
Similarity:70/220 - (31%) Gaps:75/220 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    74 DELLFEIFQYLDTSSILAVMHCSPRFENLLLDHRFYHHIDLSNGPLPMGILEEILGRATEKTHTI 138
            |..|..|.|||....:|.:..||                :::|    .|:|....|....|:..:
Human   132 DSSLGRIAQYLKGLEVLELGGCS----------------NITN----TGLLLIAWGLQRLKSLNL 176

  Fly   139 KICGPPSS---QHVAGEFRQFTQTLSSVFPRVVQLKVLELEGVSL-------DFEYIHITEFPAT 193
            :.|...|.   .|:||..|...:            ..|.||.::|       |....||:.....
Human   177 RSCRHLSDVGIGHLAGMTRSAAE------------GCLGLEQLTLQDCQKLTDLSLKHISRGLTG 229

  Fly   194 LRRLKLKDCSVRVGDTPKSIFYSIELHLLDLEDLSIEDNSWFEPYYIMGLSKLPSLRRLSLKGCQ 258
            ||.|.|..|.                        .|.|..      ::.||.:.|||.|:|:.|.
Human   230 LRLLNLSFCG------------------------GISDAG------LLHLSHMGSLRSLNLRSCD 264

  Fly   259 ALCKFVPYGSMAARFGFQKLESLDL 283
            .:.   ..|.|....|..:|..||:
Human   265 NIS---DTGIMHLAMGSLRLSGLDV 286

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5003NP_651593.1 F-box 69..111 CDD:425796 9/36 (25%)
leucine-rich repeat 610..635 CDD:275381
FBXL14NP_689654.1 Required for down-regulation of SNAI1 2..48
F-box_FBXL14 6..46 CDD:438897
AMN1 90..296 CDD:187754 48/220 (22%)
leucine-rich repeat 92..118 CDD:275381
leucine-rich repeat 119..142 CDD:275381 4/9 (44%)
LRR 1 144..163 5/38 (13%)
leucine-rich repeat 145..170 CDD:275381 7/44 (16%)
LRR 2 170..191 4/20 (20%)
leucine-rich repeat 171..203 CDD:275381 7/43 (16%)
LRR 3 203..225 6/21 (29%)
leucine-rich repeat 204..229 CDD:275381 6/24 (25%)
AMN1 228..401 CDD:187754 21/92 (23%)
LRR 4 229..250 7/50 (14%)
leucine-rich repeat 230..254 CDD:275381 9/53 (17%)
LRR 5 254..275 8/23 (35%)
leucine-rich repeat 255..280 CDD:275381 8/27 (30%)
leucine-rich repeat 281..306 CDD:275381 3/6 (50%)
leucine-rich repeat 307..331 CDD:275381
leucine-rich repeat 332..357 CDD:275381
leucine-rich repeat 358..382 CDD:275381
Blue background indicates that the domain is not in the aligned region.

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