DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5003 and si:dkey-192l18.9

DIOPT Version :10

Sequence 1:NP_651593.1 Gene:CG5003 / 43344 FlyBaseID:FBgn0039554 Length:713 Species:Drosophila melanogaster
Sequence 2:XP_001344855.1 Gene:si:dkey-192l18.9 / 100005961 ZFINID:ZDB-GENE-120709-25 Length:476 Species:Danio rerio


Alignment Length:441 Identity:83/441 - (18%)
Similarity:142/441 - (32%) Gaps:133/441 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 AVPVQPVLPQ-IPTEEE-------------PEIKQRKREKEHKESLDRETECNLMDFCDELLFEI 80
            |:.:.|..|| :|...|             |..:.:..:..|...:|        ...|.:|..|
Zfish    54 ALILNPNPPQTVPNGRESSLGETVALIHPPPATRSKSTKPPHTALID--------ILPDPVLLHI 110

  Fly    81 FQYLDTSSILAVMHCSPRFENLLLDHRFYHHIDLSNGPLPMG--ILEEILGRATEKTHTI----- 138
            ..||.|..:........|:.||..|.|.:..|.| ||.|...  .|:.:..|..:.|..:     
Zfish   111 LSYLSTPHLCLCARVCRRWYNLSWDPRLWSTIRL-NGELLNADRALKVLTHRLCQDTPNVCLTLE 174

  Fly   139 -------------------KICGPPSSQHVAGEFRQFTQTLSSVF--------------PRVVQL 170
                               :.|.......|||.:......:..|.              |:|..:
Zfish   175 TVVASGCRRLSDRGLRVIARCCPELRCLEVAGCYNVSNDAVFDVVSKCPNLEHLDVSGCPKVTCI 239

  Fly   171 KVLE--------LEGVSLDFEYIHITEFPA--------------TLRRLKLKDCSVRVGDTPKSI 213
            .:.|        |.|..:...|:::|:..:              .|..|.|:.| :|:.|   ..
Zfish   240 SLTEEGSVQHTPLHGQQIGLRYLNMTDCVSLEDKGLKTIAIHCPRLTHLYLRRC-IRITD---ES 300

  Fly   214 FYSIELHLLDLEDLSIEDNSWFEPYYIMGLSKL---------------------------PSLRR 251
            ...:.||...|.:||:.|......:.:..:::|                           |.||.
Zfish   301 LRQLALHCTALRELSLSDCHLVGDFGLREVARLEGRLRYLSVAHCMRITDVGLRYVARYCPRLRY 365

  Fly   252 LSLKGCQALCKFVPYG-SMAARFGFQKLESLDLRQTP-INNSDLQCFS-AIENLKELLLESPQIL 313
            |:.:||:.|   ...| |..|| ...:|.|:|:.:.| ::::.|:..: ..:.|:.|.|...:.|
Zfish   366 LNARGCEGL---TDQGLSYLAR-NCPRLRSIDVGRCPLVSDAGLEVLAHCCKMLRRLSLRGCESL 426

  Fly   314 HSKQAVAKKNTNGNATDEAASPQPDSLKVLS-DDEPSTSRAAMEHLRACKV 363
            ..:..:|...         ..|:...|.|.. |..|...|...:|.|.|.:
Zfish   427 TGRGLMALAE---------GCPELQLLNVQECDVPPEALRLVRQHCRRCVI 468

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5003NP_651593.1 F-box 69..111 CDD:425796 11/41 (27%)
leucine-rich repeat 610..635 CDD:275381
si:dkey-192l18.9XP_001344855.1 F-box_FBXL7 99..142 CDD:438892 12/50 (24%)
leucine-rich repeat 114..138 CDD:275381 6/23 (26%)
leucine-rich repeat 139..172 CDD:275381 8/33 (24%)
FBXL3_LRR-like <152..350 CDD:480268 28/201 (14%)
leucine-rich repeat 173..198 CDD:275381 1/24 (4%)
leucine-rich repeat 199..220 CDD:275381 4/20 (20%)
leucine-rich repeat 225..258 CDD:275381 5/32 (16%)
leucine-rich repeat 259..284 CDD:275381 2/24 (8%)
AMN1 280..465 CDD:187754 41/201 (20%)
leucine-rich repeat 285..310 CDD:275381 8/28 (29%)
leucine-rich repeat 311..336 CDD:275381 5/24 (21%)
leucine-rich repeat 337..362 CDD:275381 0/24 (0%)
leucine-rich repeat 363..388 CDD:275381 10/28 (36%)
leucine-rich repeat 389..414 CDD:275381 5/24 (21%)
leucine-rich repeat 415..440 CDD:275381 5/33 (15%)
leucine-rich repeat 441..465 CDD:275381 6/23 (26%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.