DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ets98B and Spdef

DIOPT Version :9

Sequence 1:NP_524535.2 Gene:Ets98B / 43334 FlyBaseID:FBgn0005659 Length:518 Species:Drosophila melanogaster
Sequence 2:NP_001103000.1 Gene:Spdef / 689210 RGDID:1594842 Length:325 Species:Rattus norvegicus


Alignment Length:414 Identity:132/414 - (31%)
Similarity:168/414 - (40%) Gaps:139/414 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   107 PSPQSSPLQSEFAAYGLGRFGGSYDSLNSPSPSLEAVSIKQELHILPPSPPESNCETPSPRSSCG 171
            |||.::|.|      ||..|..||.::                     .|.:.:.....|.:|..
  Rat    45 PSPPATPEQ------GLSAFYLSYFNM---------------------YPEDGSWVAKVPEASAR 82

  Fly   172 ESIKAEPLDADIESLIDLNSLLQQQSLQSPQNLQDTKPDHQLLRECLEDTSFQKRHNLKPLALES 236
            |....||               :|..:...|...:|..:|.|                       
  Rat    83 EDHPEEP---------------EQCPVIDSQASGNTLDEHSL----------------------- 109

  Fly   237 FIGGLAEVRGDFEPVISLALEHAKREADAICAELQISQDPNGWSPAQVHAWLRSTLAQFRLPPV- 300
                        |.|.|:.:....::.:..|..|.|:.||..|||..|..||..|..|:||||. 
  Rat   110 ------------EQVQSMVVGEVLKDIETACKLLNITADPGDWSPGNVQKWLLWTEHQYRLPPAG 162

  Fly   301 -ADLELHFCENGAALALLSEEEFVRRLPESGSTLHAQLEIWKMAYADQPAHQQHSQQSASTDHWP 364
             |..||    .|..|..:|||:|.:|.|..|..|||.|:|||.|                  .|.
  Rat   163 KAFQEL----GGKELCAMSEEQFRQRAPLGGDVLHAHLDIWKSA------------------AWM 205

  Fly   365 ASYAMP---HLDLDYNEDSEDDDDMEADAQVAPLNGSTTSPPATNASNGGTATVKRPNGGRTGGG 426
            .....|   |.....:|:...|.::::..                                   .
  Rat   206 KERTSPGALHYCASTSEEGWTDGEVDSSC-----------------------------------S 235

  Fly   427 GSHIHLWQFLKELLASPQVNGTAIRWIDRSKGIFKIEDSVRVAKLWGRRKNRPAMNYDKLSRSIR 491
            |..|||||||||||..|...|..|||:::.|||||||||.:||:|||.|||||||||||||||||
  Rat   236 GQPIHLWQFLKELLLKPHSYGRFIRWLNKEKGIFKIEDSAQVARLWGVRKNRPAMNYDKLSRSIR 300

  Fly   492 QYYKKGIMKKTERSQRLVYQFCHP 515
            |||||||::|.:.||||||||.||
  Rat   301 QYYKKGIIRKPDISQRLVYQFVHP 324

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ets98BNP_524535.2 SAM_PNT-PDEF-like 264..345 CDD:188878 37/82 (45%)
ETS 429..517 CDD:197710 65/87 (75%)
SpdefNP_001103000.1 SAM_PNT-PDEF-like 124..204 CDD:188878 37/101 (37%)
Ets 241..322 CDD:278602 60/80 (75%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166347742
Domainoid 1 1.000 133 1.000 Domainoid score I4966
eggNOG 1 0.900 - - E1_KOG3805
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 183 1.000 Inparanoid score I3872
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D388142at33208
OrthoFinder 1 1.000 - - FOG0006425
OrthoInspector 1 1.000 - - oto95967
orthoMCL 1 0.900 - - OOG6_108721
Panther 1 1.100 - - LDO PTHR11849
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X5385
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1312.760

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