DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12877 and RNH70

DIOPT Version :10

Sequence 1:NP_001034073.1 Gene:CG12877 / 43333 FlyBaseID:FBgn0039544 Length:991 Species:Drosophila melanogaster
Sequence 2:NP_011792.1 Gene:RNH70 / 853193 SGDID:S000003508 Length:553 Species:Saccharomyces cerevisiae


Alignment Length:396 Identity:113/396 - (28%)
Similarity:165/396 - (41%) Gaps:132/396 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   624 CNTPAIYKNSCMLAINKLRKEALEAGNK-------------PSVACKTVSHE---MMLGGKRALT 672
            ||..::.| ..:|.|..|:.:..|.|..             |.....|. |.   |..|.|..|.
Yeast    91 CNRSSLQK-MIVLFIPGLQPDDFENGKNTFNEISDDNFKYIPGEIASTF-HTFPVMAPGSKMTLF 153

  Fly   673 TSWS---------VEKKGKLSSLGNGEPFDALDAEKAYKM-VFDLRLTEEQLVENGYP-RPGDKR 726
            :.::         :||..||..|           :|..|: :.||.|:|:|||.|.|| ..||  
Yeast   154 SPYNSFINVGLSKMEKINKLKEL-----------QKKKKITINDLVLSEQQLVANDYPLDSGD-- 205

  Fly   727 GSAVIRACRPNRRPNQKERYCSRCGKVFSLDIYEHQSFDMCNYHPKSTGYRRGFTDHQHRCCQQP 791
                                               .:||                          
Yeast   206 -----------------------------------TNFD-------------------------- 209

  Fly   792 AGTPGCTYANYHVSDYYDPEKLTCFVKTIERGEEFVPTKKDIYALDCEMCYTTHGIELTRVTVVD 856
                                  |.:|:|:    :|......|:|||||||.:..|:.|||:::|:
Yeast   210 ----------------------TDWVQTV----DFTHGGSHIFALDCEMCLSEQGLVLTRISLVN 248

  Fly   857 INGRSVYDALVKPDNQIVDYNTTYSGITEAMLS-NETRTIRDVQAVLMSMFHAKTVLVGHSLESD 920
            .:...:|:.|||||..||||.|.||||||..|: ...:|:|:||..|:.:.....:|:||||::|
Yeast   249 FDNEVIYEELVKPDVPIVDYLTRYSGITEEKLTVGAKKTLREVQKDLLKIISRSDILIGHSLQND 313

  Fly   921 LKALKLIHDVVVDTSVLFPHKMGPPKKRALKTLCIENLKRIIQESEAGHDSAEDAEVCIQLIKYY 985
            ||.:||.|.:||||::::.||.|.|.|.:||.|....|.:.||..|  |||.|||..|::|.|..
Yeast   314 LKVMKLKHPLVVDTAIIYHHKAGDPFKPSLKYLSETFLNKSIQNGE--HDSVEDARACLELTKLK 376

  Fly   986 LRNKIS 991
            :.|.::
Yeast   377 ILNGLA 382

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12877NP_001034073.1 PTZ00121 <128..490 CDD:173412
PRK05035 <458..>583 CDD:481472
EloA-BP1 572..734 CDD:464914 34/136 (25%)
REX1_like 834..983 CDD:99848 70/149 (47%)
RNH70NP_011792.1 REX1_like 226..374 CDD:99848 70/149 (47%)
Blue background indicates that the domain is not in the aligned region.

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