DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12877 and AT5G40310

DIOPT Version :10

Sequence 1:NP_001034073.1 Gene:CG12877 / 43333 FlyBaseID:FBgn0039544 Length:991 Species:Drosophila melanogaster
Sequence 2:NP_001330756.1 Gene:AT5G40310 / 834029 AraportID:AT5G40310 Length:357 Species:Arabidopsis thaliana


Alignment Length:298 Identity:70/298 - (23%)
Similarity:106/298 - (35%) Gaps:93/298 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   744 ERYCSRCGKVFSLDIYEH-QSFDMCNYH-----PK--------------------STGYRRGFTD 782
            |..|..|.|        | :|||....|     ||                    |...||   .
plant    43 EPTCGICNK--------HCRSFDSLREHLIGPLPKQECKNIFSIRGCRFCLTILESPNARR---I 96

  Fly   783 HQHRCCQQPAGTPGCT-------YANYHVSDYYDPEKLTCFVKTIERGEEFVPTKKDIYALDCEM 840
            ||.| ||....|.|..       ..|....||           |..|....|       ||.|:|
plant    97 HQER-CQLSNVTSGLMIRMAALGLRNNSTIDY-----------TSSRSPRVV-------ALSCKM 142

  Fly   841 C--YTTHGIEL-TRVTVVDINGRSVYDALVKPDNQIVDYNTTYSGITEAMLSNETR---TIRDVQ 899
            .  .:...::| .||.:.|.:...|:...|||...:.:|....:||....|.:..|   ..|.||
plant   143 VGGGSDGSLDLCARVCITDESENVVFHTYVKPTIPVTNYRYEMTGIRPENLRDAMRLKHAQRKVQ 207

  Fly   900 AVLMS---MFHAK------TVLVGHSLESDLKALKLIH--DVVVDTSVLFPHKMGPPKKRALKTL 953
            ..|.:   |:..:      .:||||.|::.|.:|:|.:  .::.||:..      ||..::.|  
plant   208 EFLCNGEPMWKIRPRNGKARILVGHGLDNHLDSLQLEYSSSMIRDTAEY------PPLMKSSK-- 264

  Fly   954 CIENLKRIIQESEAGHD---SAEDA-EVCIQLIKYYLR 987
             :.|..:.:.::..|:|   ..:|. |.|:..::.|.|
plant   265 -LSNSLKYLTQAYLGYDIHVGIQDPYEDCVATMRLYTR 301

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12877NP_001034073.1 PTZ00121 <128..490 CDD:173412
PRK05035 <458..>583 CDD:481472
EloA-BP1 572..734 CDD:464914
REX1_like 834..983 CDD:99848 41/169 (24%)
AT5G40310NP_001330756.1 C2H2 Zn finger 17..39 CDD:275371
C2H2 Zn finger 46..63 CDD:275371 7/24 (29%)
REX4_like 136..300 CDD:99847 42/179 (23%)
Blue background indicates that the domain is not in the aligned region.

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