DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12877 and AT3G15080

DIOPT Version :10

Sequence 1:NP_001034073.1 Gene:CG12877 / 43333 FlyBaseID:FBgn0039544 Length:991 Species:Drosophila melanogaster
Sequence 2:NP_566499.1 Gene:AT3G15080 / 820738 AraportID:AT3G15080 Length:275 Species:Arabidopsis thaliana


Alignment Length:162 Identity:58/162 - (35%)
Similarity:82/162 - (50%) Gaps:12/162 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly   832 DIYALDCEMCYTTHGIE--LTRVTVVDINGRSVYDALVKPDNQIVDYNTTYSGITEAMLSNETRT 894
            |..|:||||...:.|.:  |.|||:|:..|..:||..|:|...:||:.|:.|||....| .:.:.
plant    82 DEVAMDCEMVGVSQGTKSALGRVTLVNKWGNVLYDEFVRPVEHVVDFRTSISGIRPRDL-RKAKD 145

  Fly   895 IRDVQAVLMSMFHAKTVLVGHSLESDLKALKLIHDV--VVDTSVLFPHKMGPPKKRALKTLCIEN 957
            .|..|..:..:...| :||||:|.:|||||.|.|..  :.||....|...|..:| :||.|..|.
plant   146 FRVAQTKVAELIKGK-ILVGHALHNDLKALLLTHPKKDIRDTGEYQPFLKGKTRK-SLKHLASEI 208

  Fly   958 LKRIIQESEAGHDSAEDAEVCIQLIKYYLRNK 989
            |...||..|  |...:||...:.|   |.:|:
plant   209 LGADIQNGE--HCPIDDARAAMML---YQKNR 235

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12877NP_001034073.1 PTZ00121 <128..490 CDD:173412
PRK05035 <458..>583 CDD:481472
EloA-BP1 572..734 CDD:464914
REX1_like 834..983 CDD:99848 55/152 (36%)
AT3G15080NP_566499.1 REX4_like 84..232 CDD:99847 55/155 (35%)
Blue background indicates that the domain is not in the aligned region.

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