DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12877 and Isg20

DIOPT Version :10

Sequence 1:NP_001034073.1 Gene:CG12877 / 43333 FlyBaseID:FBgn0039544 Length:991 Species:Drosophila melanogaster
Sequence 2:NP_001278149.1 Gene:Isg20 / 57444 MGIID:1928895 Length:300 Species:Mus musculus


Alignment Length:144 Identity:42/144 - (29%)
Similarity:70/144 - (48%) Gaps:18/144 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   832 DIYALDCEMCYTTHGI------ELTRVTVVDINGRSVYDALVKPDNQIVDYNTTYSGITEAMLSN 890
            ::.|:||||.    |:      .|.|.::|:|:|..:||..::|:.:|.||.|..||:|...:..
Mouse     6 EVVAMDCEMV----GLGPQRVSGLARCSIVNIHGAVLYDKYIRPEGEITDYRTQVSGVTPQHMVR 66

  Fly   891 ETRTIRDVQAVLMSMFHAKTVLVGHSLESDLKALK------LIHDVVVDTSVLFPHKMGPPKKRA 949
            .| ...:.:..::.:...|.| |||.|:.|..|||      .|:|...|..:....|:....:.:
Mouse    67 AT-PFGEARLEILQLLKGKLV-VGHDLKHDFNALKEDMSKYTIYDTSTDRLLWHEAKLQYYSRVS 129

  Fly   950 LKTLCIENLKRIIQ 963
            |:.||...|.:.||
Mouse   130 LRLLCKRLLHKNIQ 143

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12877NP_001034073.1 PTZ00121 <128..490 CDD:173412
PRK05035 <458..>583 CDD:481472
EloA-BP1 572..734 CDD:464914
REX1_like 834..983 CDD:99848 42/142 (30%)
Isg20NP_001278149.1 DnaQ_like_exo 8..144 CDD:447876 42/142 (30%)
Blue background indicates that the domain is not in the aligned region.

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