DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12877 and rexo1

DIOPT Version :9

Sequence 1:NP_001034073.1 Gene:CG12877 / 43333 FlyBaseID:FBgn0039544 Length:991 Species:Drosophila melanogaster
Sequence 2:NP_001119888.1 Gene:rexo1 / 564551 ZFINID:ZDB-GENE-030131-1650 Length:1207 Species:Danio rerio


Alignment Length:1270 Identity:335/1270 - (26%)
Similarity:525/1270 - (41%) Gaps:353/1270 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MLPSTGLFKGFLCPYF----DGQDAA-SCKRPFCHFKHARK----------------------DE 38
            ||.|||.|:|..||::    :|:..| .|.||:|||:|:|:                      .|
Zfish     1 MLRSTGFFRGIDCPFYCQNNNGKSGADGCSRPYCHFRHSRQRRGSSGIYDIKKTKALSSNQNDQE 65

  Fly    39 LEAAPPAEPSPVPKYKPAP--------------KLLSLPLPQITLCAPRKKSNL------EYHP- 82
            .:...|....|..:|...|              :|::..:..:.....|.|..|      ||.| 
Zfish    66 YDPFSPEVVRPREQYNGEPPSTGQDVDLGTAELELVNRAIEAVRSELERDKKKLSQIGDQEYEPT 130

  Fly    83 ------EKP-----------------ALDASPAKKKQEASVD------SAPKYVPGQPSVTN--- 115
                  .||                 |.:.:|:....:.::|      :|.:|||...|.:|   
Zfish   131 TSSVKRHKPPVPSHEGYDPGSYQMDQASEYTPSPHSSKYTLDTENTNANALEYVPTAVSKSNIKK 195

  Fly   116 ----------------------GEEYDDW-----------QAVL------EKEIDEQMQVEIEEQ 141
                                  ..|||..           |..|      .|.:..:.|.|.||.
Zfish   196 LTPRPPSHAKCKYTLDTSKPTTDMEYDPLSNYSAKPTIKEQKTLALAGQRRKRLYSEKQGEAEEY 260

  Fly   142 VQNNDEEQKIDTVAE--------NEEDQENT---------------------------------- 164
            |....:.:...|.|:        :|.|:|::                                  
Zfish   261 VPTVKKPKSSFTKADVPKYTASFSESDEESSGTEYRPVNVSRLKHNRINIGLPKSSAMGQQKKQI 325

  Fly   165 QLTDA-------RDSHEKD-RKPSKERERDIEKKKIRELKREKIKDRDRDRDRDREKDKEKSKER 221
            ..|||       .|:..:| .:.:|:.::.:...:.:..|.:|:|..::|.::..:|:::.|   
Zfish   326 SKTDAYFSPCESDDTESQDVNRTNKKTDKKVSASQTKTNKTDKVKKENKDSNKKSQKEQQDS--- 387

  Fly   222 DREKEKNDRDKRKSSHSDKERSKERNTSSSSSSKHKSSSSSSSSKKSSSSDKH----RDDKSSSS 282
                  :..||...|.|.|:.|:.:|...||.||.||....|:||.:...||.    :.:.|...
Zfish   388 ------SSVDKTSKSSSKKDNSQSKNIEGSSKSKEKSHKDKSASKSAEEKDKKVVKIKTESSHKE 446

  Fly   283 RHKSSS----------------------------SSSSSKSHHHKSSSSSSRSKTKRSSS--SSK 317
            ::|||.                            .|.|.:....|||||:::.|:|:|.|  ..|
Zfish   447 KNKSSDGIKKPKMDKPVKTDKVLSKIKDQKNGKLESGSKEKDKKKSSSSNTKDKSKKSISVLDHK 511

  Fly   318 SAGTSK-------------SEPEADKDTEAAVLTPAEPM------------------------DD 345
            .|..:|             |..|.|::.|..|...|...                        ||
Zfish   512 EAKKTKQRNLSHVDLFGADSAEEEDEEDERIVRKSASAFKRGGLVNNKRKSSSSSEDDSEVDEDD 576

  Fly   346 --LDDMDFDFEADTSE--GEIVRQCEMIFDEMEKKFAQMHKDEGGNANPESSRKRKAPSPDI--- 403
              :|..||....|..|  .:.:.:|..||:  |.|..:| :|:|        |:.|.||.:.   
Zfish   577 GGVDTEDFSCLQDVMEYDSDPMEECLRIFN--ESKEVKM-EDKG--------RQAKQPSRETEEE 630

  Fly   404 DTFTEAATAAL---QKRRVAHENADKITPHLAPSAAMRKPNHVRNAMQAIFNRRAELRRQEKLQA 465
            |..||:....|   ||:||:|..|...:.....|..|                     :|.::.|
Zfish   631 DEETESTLTTLFPGQKKRVSHFKAQGKSETTMNSVPM---------------------QQRRMTA 674

  Fly   466 -EASAEQVRQAQERVRQAQEELRQAKVNSNLTPLI---------------SRSALTPPVRSARSI 514
             |...:::::||::..|..|.::.|..:::..|::               |..:..|...|:|.:
Zfish   675 QEICYQRMQKAQQQAAQLAEAVKTASASASSNPVLGISGEKRRVAHRPNASLPSSKPADASSRVL 739

  Fly   515 APVANIVAIARAKKKIEELQAEKKPAFTPAQSFKGAGRVAHKPTAALDKAAPVSNAEKPTVLDPS 579
            :| ..:|....:.|.........|...|..|.     ||||.||      ...|..::|.:....
Zfish   740 SP-TRVVTDQLSVKAQTSAGILSKTISTTVQK-----RVAHTPT------LKSSTMKRPVIPTEF 792

  Fly   580 SSKISYNVRIQYYEMMVRHCTVIYPQLADAWERAQVEELTVFKKCNTPAIYKNSCMLAINKLRKE 644
            .:|:...||.:|..:.:..|........||::.|..||..|:.:.::..||.|..:..:.|||..
Zfish   793 GAKVPTIVRQRYLNIFIDECLKFCSSEQDAFQLALEEEKVVYDRSSSKNIYLNVAVNTVKKLRSR 857

  Fly   645 ALEAG---NKPSVAC--KTVSHEMMLGGKRALTTSWSVEKKGKLSSLGNGEPFDALDAEKAYKMV 704
            :..|.   ..|:|:.  |..|||.:|||:.|.|||:::.:.||...:   .|..|:    .||.:
Zfish   858 STPASPVTKSPAVSVNKKAQSHEEVLGGRLAATTSFTINRSGKQHDV---NPKGAI----LYKKL 915

  Fly   705 FDLRLTEEQLVENGYPRPGDK-RGSAVIRACRPNRRPNQKERYCSRCGKVFSLD-----IYEHQS 763
            ....:|||||.|:|||.|..: .|.||:......:..:...:.|.|||..:.::     :.:.: 
Zfish   916 RKYAMTEEQLQEHGYPLPHPEISGHAVVHNLPEKKNNDPFSKICCRCGAEYKVNSNGSCVRKEE- 979

  Fly   764 FDMCNYHPKSTGYRR--GFTDHQHRCCQQPAGTPGCTYANYHVSDYYDPEKLTCFVKTIERGEEF 826
               |::|.......|  |..:..:.||....|:|||.....||.| ...|.|..||||..:    
Zfish   980 ---CSHHWGRLRRNRVPGGWETLYNCCSGAVGSPGCEVCKQHVQD-GRKESLDGFVKTFSK---- 1036

  Fly   827 VPTKKD----IYALDCEMCYTTHGIELTRVTVVDINGRSVYDALVKPDNQIVDYNTTYSGITEAM 887
             |...|    :||||||||||..|:|||||||::...:.|||..|||.:::|||||.:||:|...
Zfish  1037 -PLPVDGNAGVYALDCEMCYTKQGLELTRVTVINSELKVVYDTFVKPGSRVVDYNTRFSGVTADD 1100

  Fly   888 LSNETRTIRDVQAVLMSMFHAKTVLVGHSLESDLKALKLIHDVVVDTSVLFPHKMGPPKKRALKT 952
            |.|.|.::|||||||:|||.|.::|:||||||||.||||||.:||||:::|||::|.|.||||:.
Zfish  1101 LENTTISLRDVQAVLLSMFSADSILIGHSLESDLFALKLIHSMVVDTAIVFPHRLGLPYKRALRN 1165

  Fly   953 LCIENLKRIIQESEAGHDSAEDAEVCIQLIKYYLR 987
            |..:.||||||::..||||:|||..|::|:.:.::
Zfish  1166 LMADYLKRIIQDNVGGHDSSEDARACMELMIWKIK 1200

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12877NP_001034073.1 CDC45 129..>199 CDD:280821 17/119 (14%)
EloA-BP1 572..736 CDD:292495 51/169 (30%)
REX1_like 834..983 CDD:99848 90/148 (61%)
DnaQ 847..>991 CDD:223916 79/141 (56%)
rexo1NP_001119888.1 EloA-BP1 785..948 CDD:292495 51/169 (30%)
REX1_like 1047..1195 CDD:99848 89/147 (61%)
DnaQ 1060..>1196 CDD:223916 79/135 (59%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170589969
Domainoid 1 1.000 215 1.000 Domainoid score I2666
eggNOG 1 0.900 - - E1_COG0847
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 336 1.000 Inparanoid score I2370
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0002085
OrthoInspector 1 1.000 - - otm24935
orthoMCL 1 0.900 - - OOG6_103246
Panther 1 1.100 - - LDO PTHR12801
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2254
SonicParanoid 1 1.000 - - X1541
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1413.780

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