DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG12877 and rexo4

DIOPT Version :10

Sequence 1:NP_001034073.1 Gene:CG12877 / 43333 FlyBaseID:FBgn0039544 Length:991 Species:Drosophila melanogaster
Sequence 2:NP_001006868.1 Gene:rexo4 / 448635 XenbaseID:XB-GENE-6258946 Length:414 Species:Xenopus tropicalis


Alignment Length:166 Identity:58/166 - (34%)
Similarity:86/166 - (51%) Gaps:22/166 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   835 ALDCEMCYTTHGIE-----LTRVTVVDINGRSVYDALVKPDNQIVDYNTTYSGITEAMLSNETRT 894
            |:||||...  |::     |.||::|::.|:.|||..|:|..::.||.|..|||....:.| ...
 Frog   230 AMDCEMVGV--GLDGEESMLARVSIVNLFGKCVYDKYVRPTERVTDYRTAVSGIRPDDIKN-GEA 291

  Fly   895 IRDVQAVLMSMFHAKTVLVGHSLESDLKALKLIH--DVVVDTSVLFPH----KMGPPKKRALKTL 953
            .:||||.:..:...:| ||||::.:|||.|.|.|  ..:.||....|.    |.|.|   :||.|
 Frog   292 FKDVQAEVAEILRGRT-LVGHAVHNDLKILFLDHPKKAIRDTQKYKPFKEKVKSGRP---SLKLL 352

  Fly   954 CIENLKRIIQESEAGHDSAEDAEVCIQLIKYYLRNK 989
            |.:.|...:|..|  |.|.:||:..::|  |.:..|
 Frog   353 CEKILNVKVQTGE--HCSVQDAQAAMRL--YTMEKK 384

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12877NP_001034073.1 PTZ00121 <128..490 CDD:173412
PRK05035 <458..>583 CDD:481472
EloA-BP1 572..734 CDD:464914
REX1_like 834..983 CDD:99848 56/158 (35%)
rexo4NP_001006868.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..174
REX4_like 229..380 CDD:99847 56/160 (35%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.