DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG12877 and prage

DIOPT Version :9

Sequence 1:NP_001034073.1 Gene:CG12877 / 43333 FlyBaseID:FBgn0039544 Length:991 Species:Drosophila melanogaster
Sequence 2:NP_001188528.1 Gene:prage / 31136 FlyBaseID:FBgn0283741 Length:852 Species:Drosophila melanogaster


Alignment Length:850 Identity:194/850 - (22%)
Similarity:347/850 - (40%) Gaps:212/850 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   239 DKERSKERNTSSSSSSKHKSSSSSSSSKKSSSSDK------------------HRDDKSSSSRHK 285
            ||.:|..:|:||..::.:.:.:::|:...:||:.:                  ::...::..::.
  Fly   109 DKMQSCNKNSSSRITTTNNNVTTTSNISGNSSNKRCPQKYTGNTLAVNSNMLAYQQQATAGGKNS 173

  Fly   286 SSSSSSSSKSHHHKSSSSSSRSKTKRSSSSSKSAGTSKSEPEADKDTEAAVLTPAEPMDDLDDMD 350
            :..|..::...:|:......:.:.......:.:||.:.||           .:||.|..:.    
  Fly   174 TRKSRHNNNKQNHQQQQQQQQQQFDHIHKRNGTAGGTGSE-----------CSPAAPTSNW---- 223

  Fly   351 FDFEADTSEGEIVRQCEMIFDEMEKKFAQMHKDEGGNANPESSRKRKAPSPDIDTFTEAATAALQ 415
              .:.......:...|      :|.|....|..  |:.|..||   .|.|.|||:.:|     |.
  Fly   224 --LQRGYGRQFVHSSC------IEDKLLGHHNP--GHRNSTSS---DATSEDIDSSSE-----LP 270

  Fly   416 KRRVAHENADKITPHLAPSAAMRKPNHVRNAMQAIFNRRAELRR---------QEKLQAEASAEQ 471
            .:...:..|..|  |.:..:..|...|.:.:.|...|.....:|         |:..|..|...|
  Fly   271 NKSKGNSCAGSI--HASGGSKSRSKRHQKQSGQQTRNPDHNGQRTGAATPCTGQKAKQGNAKWRQ 333

  Fly   472 VR---QAQERVRQAQEELRQAKVNSNLTPLISRSALTPPVRSARSIAPVANIVAIARAKKKIEEL 533
            .:   .:..:.:|.|::::|.|...|                                       
  Fly   334 QQPNPSSNNQQQQMQQQMQQQKRGRN--------------------------------------- 359

  Fly   534 QAEKKPAFTPAQSFKGAGRVAHKP-----------------TAALDKAAPVSNAEKPTVLDPSSS 581
               |||.       |.:..:...|                 ::||  ::|.|:|.......|::|
  Fly   360 ---KKPG-------KWSNNIIDNPNSNHGGSSQQKTCDSSSSSAL--SSPTSSATTSATSSPTNS 412

  Fly   582 KISY------NVRIQ-------YYEMMVRHCTVIYPQLADAWERAQVEELTVFKKCNTPAIYKNS 633
            ..||      ..||:       ..|:..::...:.|.|.. :|:.:.::.||.::.....|  ::
  Fly   413 PTSYPRANGNRKRIEAALEWRREQELGRQNANFLVPPLRQ-YEQLEFDDKTVVQQLRRHII--DN 474

  Fly   634 CMLAI------NKLRKEALEAGNKPSVACKTVSHEMMLGG----KRALT--------TSWSVEKK 680
            .:|.:      :.:.:.|:|       ..|.:.|......    .:|:|        |:.:.|:.
  Fly   475 HLLRVYGFPVDSVVHEGAIE-------IFKCMPHMSFAAALAETAQAVTVINYHDGLTNRAEEEV 532

  Fly   681 GKLSSLGNGEPFDALDAEKAYKMVFDLRLTEEQLVENGYPRPGDKRGSAVIRACR--PNRRPNQK 743
            ...:..||..| .:||:|..    .:...:|.:...:.....|:......::.|.  |..|...|
  Fly   533 ANSTDSGNSSP-QSLDSESG----GEWSGSECESSNSSSSSAGEAALGLELKYCHFVPVERSLSK 592

  Fly   744 ERYCSRCGKVFSLD--IYEHQSFDMCNYHPKSTGYRRGFTDHQH---RCCQQ-PAGTPGCTYANY 802
            .  |:||.:.|.:|  ..::.:.:.|.||  |..|:|.:....|   .||.: ...:|||...:.
  Fly   593 P--CARCKRHFLVDELTGQYLTHEECQYH--SGKYQRYYDGVSHGRWTCCNEGEESSPGCCLGDR 653

  Fly   803 HV---------SDYYDPEKLTCFVKTIERGE-EFVPTKKDIYALDCEMCYTTHGIELTRVTVVDI 857
            ||         ..|||      ||:|..||. |..|.   :|||||||.||..|:::|:|::|.:
  Fly   654 HVWSGSVVGVNGPYYD------FVRTEHRGSGEDEPA---VYALDCEMSYTGRGLDVTKVSLVAL 709

  Fly   858 NGRSVYDALVKPDNQIVDYNTTYSGITEAMLSNETRTIRDVQAVLMSMFHAKTVLVGHSLESDLK 922
            ||:.||:..|:|...|:||||.||||||..|.:..:::.:||..|:.:..|.|:|:||.||:||:
  Fly   710 NGQLVYEHFVRPVCDIIDYNTQYSGITETDLCSGAKSLAEVQRDLLQLITADTILIGHGLENDLR 774

  Fly   923 ALKLIHDVVVDTSVLFPHKMGPPKKRALKTLCIENLKRIIQ--ESEAGHDSAEDAEVCIQLIKYY 985
            ||:|:|:.::|||:.|||..|.|.:|||:.|...:|||.||  :...||.|.||:..|::|:.:.
  Fly   775 ALRLVHNTLIDTSISFPHCNGFPYRRALRHLTKVHLKRDIQAGDGTTGHSSFEDSRACMELMLWR 839

  Fly   986 LRNKI 990
            :..::
  Fly   840 VNREL 844

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12877NP_001034073.1 CDC45 129..>199 CDD:280821
EloA-BP1 572..736 CDD:292495 31/196 (16%)
REX1_like 834..983 CDD:99848 71/150 (47%)
DnaQ 847..>991 CDD:223916 61/145 (42%)
prageNP_001188528.1 PH-like <614..650 CDD:302622 12/37 (32%)
DnaQ 675..>837 CDD:223916 75/164 (46%)
REX1_like 686..837 CDD:99848 71/150 (47%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45469476
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0847
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D774159at2759
OrthoFinder 1 1.000 - - FOG0002085
OrthoInspector 1 1.000 - - otm2496
orthoMCL 1 0.900 - - OOG6_103246
Panther 1 1.100 - - P PTHR12801
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2254
SonicParanoid 1 1.000 - - X1541
109.780

Return to query results.
Submit another query.