DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12877 and Isg20

DIOPT Version :10

Sequence 1:NP_001034073.1 Gene:CG12877 / 43333 FlyBaseID:FBgn0039544 Length:991 Species:Drosophila melanogaster
Sequence 2:XP_038961563.1 Gene:Isg20 / 293052 RGDID:1306407 Length:184 Species:Rattus norvegicus


Alignment Length:159 Identity:43/159 - (27%)
Similarity:76/159 - (47%) Gaps:28/159 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   832 DIYALDCEMCYTTHGI------ELTRVTVVDINGRSVYDALVKPDNQIVDYNTTYSGITEAMLSN 890
            ::.|:||||.    |:      .|.|.::|:::...:||..::|:.:|.||.|..||||...::.
  Rat     6 EVVAMDCEMV----GLGPQRVSGLARCSIVNVHSAVLYDKYIQPEGEITDYRTQVSGITPQHMAR 66

  Fly   891 ETRTIRDVQAVLMSMFHAKTVLVGHSLESDLKALK------LIHDVVVDTSVLFPHKMGPPKKRA 949
            .| ...:.:..::.:...|.| |||.|:.|..|||      .|:|...|..:....|:....:.:
  Rat    67 AT-PFAEARLEILQLLKGKLV-VGHDLKHDFSALKEDMRKYTIYDTSTDMLLWHEAKLHCYSRVS 129

  Fly   950 LKTLCIENLKRIIQESEAGHDSAEDAEVC 978
            |:.||    ||::      |.|.::.:.|
  Rat   130 LRLLC----KRLL------HKSIQNDQDC 148

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12877NP_001034073.1 PTZ00121 <128..490 CDD:173412
PRK05035 <458..>583 CDD:481472
EloA-BP1 572..734 CDD:464914
REX1_like 834..983 CDD:99848 43/157 (27%)
Isg20XP_038961563.1 DnaQ_like_exo 8..159 CDD:447876 43/157 (27%)
Blue background indicates that the domain is not in the aligned region.

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