DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12877 and isg20

DIOPT Version :10

Sequence 1:NP_001034073.1 Gene:CG12877 / 43333 FlyBaseID:FBgn0039544 Length:991 Species:Drosophila melanogaster
Sequence 2:XP_003201484.2 Gene:isg20 / 100534720 ZFINID:ZDB-GENE-100422-17 Length:338 Species:Danio rerio


Alignment Length:396 Identity:83/396 - (20%)
Similarity:127/396 - (32%) Gaps:149/396 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   620 VFKKCNTPAIYKNSCMLAINKLRKEALEAGNKPSVACKTVSHEMMLGGKRALTTSWSVEKKGKLS 684
            |.:..:|||..|.:..::..|.:.:..:...|.:.|....|.|...|.||.|..:       |..
Zfish    14 VEQNIHTPASVKETSSISHQKKKCKRKKNIKKKNPAIHDTSFEQNRGQKRKLLDN-------KTE 71

  Fly   685 SLGNGEPFDALDAEKAYKMVFDL-RLTEEQL------VENGYPR----PGDKRGSAVIRACRPNR 738
            .:.||...|.: :|::..|.|.. |||...|      |::|:..    |...|.|..:|      
Zfish    72 CIKNGSTSDFV-SEESNNMQFKRPRLTHHTLPGESWEVDSGFSSESSPPTSGRSSPCLR------ 129

  Fly   739 RPNQKERYCSRCGKVFSLDIYEHQSFDMCNYHPKSTGYRRGFTDHQHRCCQQPAGTPGCTYANYH 803
                                                      .||..                  
Zfish   130 ------------------------------------------IDHSR------------------ 134

  Fly   804 VSDYYDPEKLTCFVKTIERGEEFVPTKKDIYALDCEMCYTTHG---IELTRVTVVDINGRSVYDA 865
                                         |.|:||||..|..|   .|:.|.::||..|..|||:
Zfish   135 -----------------------------IVAMDCEMVGTGPGGRRSEVARCSIVDYYGNVVYDS 170

  Fly   866 LVKPDNQIVDYNTTYSGITEAMLSNETRTIRDVQAVLMSMFHAKTVLVGHSLESDLKA------- 923
            .:.|.:.:.||.|.:|||....| .:.......|..::.:...| ::|||:|..||..       
Zfish   171 YILPQDPVTDYRTRWSGIRSHHL-RQAVPFEHAQNEILKILKGK-IIVGHALYHDLNVLYISVQP 233

  Fly   924 -----------LKLIHDVVVDTSVLFPHKMGPPKKRALKTLCIENLKRIIQESEAGHDSAEDAEV 977
                       |:.::||..:.::            :||.|..:.|.|.||....||.|.|||..
Zfish   234 HMIRDTCSCVLLRQLYDVNQNCNI------------SLKKLAQKLLNRTIQVDRQGHCSVEDALS 286

  Fly   978 CIQLIK 983
            .:.|.|
Zfish   287 ALDLYK 292

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12877NP_001034073.1 PTZ00121 <128..490 CDD:173412
PRK05035 <458..>583 CDD:481472
EloA-BP1 572..734 CDD:464914 31/124 (25%)
REX1_like 834..983 CDD:99848 48/169 (28%)
isg20XP_003201484.2 ISG20 136..292 CDD:99852 48/169 (28%)
Blue background indicates that the domain is not in the aligned region.

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