DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CROT and DRP4A

DIOPT Version :9

Sequence 1:NP_001334704.1 Gene:CROT / 43332 FlyBaseID:FBgn0039543 Length:618 Species:Drosophila melanogaster
Sequence 2:NP_176253.1 Gene:DRP4A / 842348 AraportID:AT1G60530 Length:301 Species:Arabidopsis thaliana


Alignment Length:316 Identity:64/316 - (20%)
Similarity:104/316 - (32%) Gaps:120/316 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   215 DTILSAPEILVALQRVRSILDYEPLGDCVPTLSHDERSTWARNRNRLRE-ISVANKETLLLV--- 275
            :|.:.||.:.....|:|      ||.|.|..|         ||.|.:|| |.:   .|:::|   
plant    25 NTPIEAPIVSSYNDRIR------PLLDTVDRL---------RNLNVMREGIQL---PTIVVVGDQ 71

  Fly   276 ---ESACME------------IC-------------------WYEQS----PKDYEESCQLGLYG 302
               :|:.:|            ||                   |.|.|    |.|.|...:.    
plant    72 SSGKSSVLESLAGINLPRGQGICTRVPLVMRLQRSSSPEPEIWLEYSDKVVPTDEEHVAEA---- 132

  Fly   303 DLHSRWADRSSSIIAFRNGRCNWTGEH-SCYDGTVSISYATFMQLSFLEVP---------EPD-- 355
                  ...::.:||       .|||. |....|:|:.......|:.:::|         :|:  
plant   133 ------ICAATDVIA-------GTGEGVSDTPLTLSVKKNNVPDLTMVDLPGITRVPVNGQPENI 184

  Fly   356 ----------WAEAEKGNVLEVKELHFQLDDTLKNEIKRVQKDIDDRGIDVTVTFTAFDDYGKDF 410
                      :.|.::..:|.|  |...:|.|....| |:.:.:|..|.......|..|      
plant   185 YEQISRMIMKYIEPQESIILNV--LSATVDFTTCESI-RMSRQVDKTGERTLAVVTKAD------ 240

  Fly   411 MKTHRLHPDSFVQ------VVMQWAYYQMHKEIA-PTYETALMRQYYNGRTETLRS 459
                 :.|:..:|      |.:...|..:...|. .|||.|.:::....||..|.|
plant   241 -----MAPEGLLQKVTADDVSIGLGYICVRNRIGEETYEEARVQEDLLFRTHPLLS 291

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CROTNP_001334704.1 None
DRP4ANP_176253.1 DLP_1 60..300 CDD:206738 49/266 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D559299at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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