DRSC/TRiP Functional Genomics Resources

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Protein Alignment CROT and cpt1b

DIOPT Version :10

Sequence 1:NP_733230.1 Gene:CROT / 43332 FlyBaseID:FBgn0039543 Length:618 Species:Drosophila melanogaster
Sequence 2:XP_012822209.2 Gene:cpt1b / 780223 XenbaseID:XB-GENE-5931920 Length:809 Species:Xenopus tropicalis


Alignment Length:661 Identity:165/661 - (24%)
Similarity:281/661 - (42%) Gaps:114/661 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 MSKDDKNTFDFDETLPSLPLPELRDTMERYYSCIQPFGTKEELAQARKTIDEFQNGVGAQLHEQL 73
            ||......:.|..:||.||:|.|.||:|||...::|....::.::.:...:|||..:|.:|.:.|
 Frog   195 MSSRQPMLYSFQMSLPKLPVPPLEDTIERYLQSVRPLLDDDKFSEMKILAEEFQKDLGRKLQKYL 259

  Fly    74 KKRAAGMRNWLGTWWEDYGYHLIRMPLLPYQLMVMPSQLEMVGVPETPEYMLKSLARHIHHSLEF 138
            ..::....|::..|||:|.|...|.|     :||..:...|..:..||.....:.|.::.|::..
 Frog   260 HLKSWWALNYVSDWWEEYIYLRGRGP-----IMVNSNYYAMDYLYVTPSTNQAARAGNVIHAMLL 319

  Fly   139 WDLTRKSSIKPLSSNGGKIKYSSALYKHFFSTCRVPGEEQDHIEKHFLTKDEGKTPSHMLISGKG 203
            :....:..:.|.....|.:...|......|:|.||||.|.|.:: |.:..      .|:.:..||
 Frog   320 YRRKLERGLIPPVMALGIVPMCSNQMVRMFNTTRVPGVETDCLQ-HLVES------RHVCVYHKG 377

  Fly   204 RQFIFDCVHEDDTILSAPEILVALQRVRSILD----YEPLGDCVPTLSHDERSTWARNRNRLREI 264
            |.:.. .::|:..:|:..::   ..:::.|||    .:|..:.:..|:...|..||:.|......
 Frog   378 RYYRL-ALYENGNLLTPRQL---QSQIQYILDDSSPPQPGEEKLAALTAGNRVHWAQARTNFFSN 438

  Fly   265 SVANKETLLLVESACMEICW-YEQSPKDYEESCQLG------LYGDLHSRWADRSSSIIAFRNGR 322
            .: |:..|..||.|...|.. .|::..:.|:...|.      |:|:.::||.|:|.|::.||||:
 Frog   439 GI-NRTALSCVERAVFFISLDEEEAGYNEEDKSSLSAYSKALLHGNCYNRWFDKSFSLVVFRNGK 502

  Fly   323 CNWTGEHSCYDGTV-----SISYAT-FMQLSFLE-----------VPEPDWAEAEKGNVLEVKEL 370
            .....|||..|..:     ..:.|| ..:|.:.|           :|.|             ..|
 Frog   503 LGLNAEHSWADAPIIGHLWEFTLATDCFELGYTEDGNCRGDAGSPLPPP-------------YRL 554

  Fly   371 HFQLDDTLKNEIKR---VQKDIDDRGIDVTVTFTAFDDYGKDFMKTHRLHPDSFVQVVMQWAYYQ 432
            .:.:....:..|:|   ..|.|.|   ||......|.|:||..:|..|..||:|.|:.:|.|:|:
 Frog   555 QWDIPPKCREVIERSYVTAKAIAD---DVDFHCLCFSDFGKGLIKKCRSSPDAFFQIALQLAHYR 616

  Fly   433 MHKEIAPTYETALMRQYYNGRTETLRSCTSAVAEFLRASSNKQVGDMSLARAFRRAVDEHKHFMN 497
            .......|||.::.|.:.:|||||:||||:...:|::|..:...........:|.|.:.|:....
 Frog   617 EKGHFCLTYEASMTRLFRDGRTETVRSCTTQTCDFVKAMEDPTQSQEKRLALYRAAAEHHQLMYR 681

  Fly   498 EARKGHGIDRHLFGLWC--------AAYESKM--------------------DIPAFYDDPMYTK 534
            .|..|.|||||||.|:.        :|:..|:                    |:..|   |.:..
 Frog   682 WAMTGKGIDRHLFCLYIVSKYLGTDSAFLQKVLSEPWRLSTSQTPQQQLKLFDLDKF---PDHVS 743

  Fly   535 SGGGGNFVLSSSTLGFTANVGFVAPMVFDGYGVFYSITSE-AVFINTTAYRDSLKTSARKFNDIF 598
            :|||                  ..|:..|||||.|....| .:.::.::...|.:|::.:|....
 Frog   744 AGGG------------------FGPVADDGYGVSYIFAGENLITLHISSKFSSPETNSHRFGQRI 790

  Fly   599 KDSFRRISVLL 609
            ..|.|.::.||
 Frog   791 CQSMRDLAQLL 801

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CROTNP_733230.1 Carn_acyltransf 26..594 CDD:459926 155/627 (25%)
cpt1bXP_012822209.2 CPT_N 39..85 CDD:465132
Carn_acyltransf 212..792 CDD:459926 156/633 (25%)
Blue background indicates that the domain is not in the aligned region.

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