DRSC/TRiP Functional Genomics Resources

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Protein Alignment CROT and cpt1ab

DIOPT Version :9

Sequence 1:NP_001334704.1 Gene:CROT / 43332 FlyBaseID:FBgn0039543 Length:618 Species:Drosophila melanogaster
Sequence 2:XP_005170764.1 Gene:cpt1ab / 560000 ZFINID:ZDB-GENE-030131-3250 Length:775 Species:Danio rerio


Alignment Length:660 Identity:166/660 - (25%)
Similarity:282/660 - (42%) Gaps:110/660 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 FDFDETLPSLPLPELRDTMERYYSCIQPFGTKEELAQARKTIDEFQNGVGAQLHEQLKKRAAGMR 81
            :.|..:||.||:|.::||:.||....:|....|:..:......:|:..:|.:|...||.::....
Zfish   166 YSFQSSLPRLPVPPVKDTVRRYLESARPLMDDEQYKRMEGLAKDFEKNLGPKLQWYLKLKSWWTS 230

  Fly    82 NWLGTWWEDYGYHLIRMPLLPYQ-------LMVMPSQLEMVGVPETPEYMLKSLARHIHHSLEFW 139
            |::..|||:|.|...|.|::...       |.|.|:.|:..           .....||..:.:.
Zfish   231 NYVSDWWEEYIYLRGRSPIMVNSNYYAMDFLYVNPTSLQAA-----------RAGNSIHAMMMYR 284

  Fly   140 DLTRKSSIKPLSSNGGKIKYSSALYKHFFSTCRVPGEEQDHIEKHFLTKDEGKTPSHMLISGKGR 204
            ....::.||||.....::...||.::..|:|||:||.|.| :.:|.   :|.|   |:.:..|||
Zfish   285 RKLDRAQIKPLYLLENRVPLCSAQWERMFNTCRIPGLETD-VLQHV---NESK---HIAVYHKGR 342

  Fly   205 QFIFDCVHEDDTILSAPEILVALQRV---RSILDYEPLGDCVPTLSHDERSTWARNRNRLREISV 266
             |....:..|..:|...||...::|:   :|  :.:|..:.:..|:..:|..||:.|::. .|..
Zfish   343 -FYKVWMFYDGRLLLPREIEQQMERILADKS--EPQPGEEFLAALTAGDRVPWAKARSQF-FIRG 403

  Fly   267 ANKETLLLVESACMEICW------YE-----QSPKDYEESCQLGLYGDLHSRWADRSSSIIAFRN 320
            .||::|..||.|...:..      ||     ||...|.:|.   |:|..:.||.|:|.::|.|:|
Zfish   404 KNKQSLDAVEKAAFFVTLDDSEQRYEPDNPIQSLDSYGKSL---LHGKCYDRWFDKSLNLIVFKN 465

  Fly   321 GRCNWTGEHSCYDGTV------SISYATFMQLSFLEV------PEPDWAEAEKGNVLEVKELHFQ 373
            |......|||..|..:      .:..:..::|.:.|.      |.|        |:...:.|.:.
Zfish   466 GTMGLNAEHSWADAPIVGHLWEQVLSSDPVRLGYTEEGHCKGNPHP--------NMPGPQRLQWD 522

  Fly   374 LDDTLKNEIKRVQKDIDDRGIDVTVTFTAFDDYGKDFMKTHRLHPDSFVQVVMQWAYYQMHKEIA 438
            :.:..:..|....|..:....||.:....|:|:||..:|..:..||.|:|:.:|.|:::...:..
Zfish   523 IPEECQTVISSSLKVANTLADDVDMHIFPFNDFGKGLIKKCKTSPDGFIQLALQLAHFRDKGKFC 587

  Fly   439 PTYETALMRQYYNGRTETLRSCTSAVAEFLRASSNKQVGDMSLARAFRRAVDEHKHFMNEARKGH 503
            .|||.::.|.:..|||||:||||:....|:.|..:::.......:..:.|.::|::....|..|.
Zfish   588 LTYEASMTRLFREGRTETVRSCTNETCAFVHAMMDEKATREERLKLLKAATEKHQNLYKLAMTGK 652

  Fly   504 GIDRHLFGLWCAAYESKMDIP----------------------AFYD---DPMYTKSGGGGNFVL 543
            |||||||.|:..:.....|.|                      ..:|   .|.|..||||     
Zfish   653 GIDRHLFCLYLVSKYLGEDSPFLKEVLSEPWRLSTSQTPLQQMELFDLKKHPEYVTSGGG----- 712

  Fly   544 SSSTLGFTANVGFVAPMVFDGYGVFYSITSE-AVFINTTAYRDSLKTSARKFNDIFKDSFRRISV 607
                         ..|:..|||||.|.|..| .:..:.::...|.:|.:.:|....|.:...|..
Zfish   713 -------------FGPVADDGYGVSYIILGEDLINFHISSKHSSHETDSHRFGSNIKQAMLDILD 764

  Fly   608 LLEQLAKESK 617
            |.:...|.:|
Zfish   765 LFQLDIKPNK 774

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CROTNP_001334704.1 None
cpt1abXP_005170764.1 CPT_N 1..46 CDD:293093
Carn_acyltransf 172..762 CDD:279140 161/640 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D559299at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.920

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