DRSC/TRiP Functional Genomics Resources

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Protein Alignment CROT and cpt1aa

DIOPT Version :10

Sequence 1:NP_733230.1 Gene:CROT / 43332 FlyBaseID:FBgn0039543 Length:618 Species:Drosophila melanogaster
Sequence 2:NP_001038319.1 Gene:cpt1aa / 558088 ZFINID:ZDB-GENE-060503-925 Length:774 Species:Danio rerio


Alignment Length:652 Identity:172/652 - (26%)
Similarity:291/652 - (44%) Gaps:100/652 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 FDFDETLPSLPLPELRDTMERYYSCIQPFGTKEELAQARKTIDEFQNGVGAQLHEQLKKRAAGMR 81
            :.|..:||.|.:|.:::|..||...:||..:.||..:.::...:|:..:|.:|...||.::....
Zfish   167 YSFQNSLPHLFVPSVKETTRRYLESVQPLLSDEEHQRMQRLALDFERNLGPKLQWYLKLKSWWAT 231

  Fly    82 NWLGTWWEDYGYHLIRMPLLPYQLMVMPSQLEMVGVPETPEYMLKSLARHIHHSLEFWDLTRK-- 144
            |::..|||:|.|...|.|     :||..:...|..:...|..:..:.|.::.|::..:  .||  
Zfish   232 NYVSDWWEEYIYLRGRGP-----IMVNSNYYVMDFLYAFPTNIQAARAGNVIHAIMLY--RRKLD 289

  Fly   145 -SSIKPLSSNGGKIKYSSALYKHFFSTCRVPGEEQDHIEKHFLTKDEGKTPSHMLISGKGRQF-- 206
             :.|||:.:....:...||.::..|:|.|:||:|:|.:: |.      ....|:::..:||.|  
Zfish   290 RAQIKPVFALSNSVPLCSAQWERLFNTSRIPGKERDSVQ-HV------SDSRHIVVYHRGRYFKV 347

  Fly   207 -IFDCVHEDDTILSAPEILVALQRV-RSILDYEPLGDCVPTLSHDERSTWARNRNR-LREISVAN 268
             :|    .|..:|...||...::|: ....:.:|..:.:..|:..:|..||..||. ||.  ..|
Zfish   348 WMF----YDGRLLLPREIEQQMERILADTSEPQPGEETLAALTAGDRVPWACARNAYLRH--GTN 406

  Fly   269 KETLLLVESACM-------EICWYEQSPKD----YEESCQLGLYGDLHSRWADRSSSIIAFRNGR 322
            |::|..||.|..       |..:.:::|.:    |.:|.   |:|..:.||.|:|.::|.|:||.
Zfish   407 KKSLDSVEKAAFFVTLDDTEQRFDQKNPVESLDRYAKSL---LHGKCYDRWFDKSINLIIFKNGT 468

  Fly   323 CNWTGEHSCYDGTVSISYATFMQLSF----LEVPEPDWAEAE-KGNVLEVKELHFQLDDTLKNEI 382
            .....|||..|..: :.:.....||.    |...|....:.| ..|:...:.|.:.:....:..|
Zfish   469 MGLNAEHSWADAPI-VGHLWEQVLSMDPVKLGYTEDGHCKGEPHANLPGPQRLQWNIPTECQTMI 532

  Fly   383 KRVQKDIDDRGIDVTVTFTAFDDYGKDFMKTHRLHPDSFVQVVMQWAYYQMHKEIAPTYETALMR 447
            .......:....||......|.|:||..:|..|..||:|:|:.:|.|:|:...:...|||.::.|
Zfish   533 TNSLSVAEALADDVDSHIIPFSDFGKGLIKKCRTSPDAFIQLALQLAHYRDKGKFCLTYEASMTR 597

  Fly   448 QYYNGRTETLRSCTSAVAEFLRASSNKQVGDMSLARAFRRAVDEHKHFMNEARKGHGIDRHLFGL 512
            .:..|||||:||||:....|:||.::....:..| :..:.|.::|:.....|..|||||||||.|
Zfish   598 LFREGRTETVRSCTTESCAFVRAMNSNHTREQKL-QLLKNAAEKHQQMYRLAMTGHGIDRHLFCL 661

  Fly   513 WCAAYESKMDIP----------------------AFYD---DPMYTKSGGGGNFVLSSSTLGFTA 552
            :........|.|                      ..:|   :|.|..||||              
Zfish   662 YVVLKYLGQDSPFLKEVLSEPWRLSTSQTPLQQGELFDLVKNPEYVTSGGG-------------- 712

  Fly   553 NVGFVAPMVFDGYGVFYSITSEAVF-INTTAYRDSLKTSARKFNDIFKDSFRR--ISVL-LEQLA 613
                ..|:..|||||.|.|..|.:. .:.::.|.|.:|.:.:|.    ::.||  |.:| |.||.
Zfish   713 ----FGPVADDGYGVAYVIVGEKLINFHISSKRSSPETDSHRFG----NNIRRAMIDMLDLFQLD 769

  Fly   614 KE 615
            |:
Zfish   770 KK 771

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CROTNP_733230.1 Carn_acyltransf 26..594 CDD:459926 160/617 (26%)
cpt1aaNP_001038319.1 CPT_N 1..47 CDD:465132
Carn_acyltransf 173..757 CDD:459926 163/630 (26%)
Blue background indicates that the domain is not in the aligned region.

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