DRSC/TRiP Functional Genomics Resources

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Protein Alignment CROT and cpt1a2b

DIOPT Version :9

Sequence 1:NP_001334704.1 Gene:CROT / 43332 FlyBaseID:FBgn0039543 Length:618 Species:Drosophila melanogaster
Sequence 2:XP_021329867.1 Gene:cpt1a2b / 550361 ZFINID:ZDB-GENE-050417-155 Length:807 Species:Danio rerio


Alignment Length:674 Identity:167/674 - (24%)
Similarity:274/674 - (40%) Gaps:158/674 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 FDFDETLPSLPLPELRDTMERYYSCIQPFGTKEELAQARKTIDEFQNGVGAQLHEQLKKRAAGMR 81
            :.:..:||.||:|.::||:|||...::|....:...:.|:...||:..:|.:|...|:.:|....
Zfish   165 YSYQTSLPHLPVPPIKDTLERYLESVKPLLDLDGFQRMRRLTSEFEKSLGNRLQRYLRLKALWAT 229

  Fly    82 NWLGTWWEDYGYHLIRMPLLP----YQLMVM-----PSQLEMVGVPETPEYMLKSLARHIHHSLE 137
            |::..|||:|.|...|.|::.    |.:..:     |:|....|...|..::.:   |.::    
Zfish   230 NYVSDWWEEYVYLRSRSPIMVNSNYYGMDFLYVTPTPNQAARAGNTITALFLYR---RKVN---- 287

  Fly   138 FWDLTRKSSIKPLSSNGGKIKYSSALYKHFFSTCRVPGEE-------QDHIEKHFLTK------- 188
                  :..:.|....|..|...:|..:..|:|.|.||||       |....|:.|.|       
Zfish   288 ------REELNPSRIPGTVIPLCAAQCERMFNTTRTPGEETGKRTFIQTCRHKYALRKWPLMQSL 346

  Fly   189 ------DEGKTPSHMLISGKGRQFIFDCVHEDDTILSAPEILVALQRVRSILD--------YEPL 239
                  ...:....:.:..:||.|.. .|:....:||..||...:||   |||        .|.|
Zfish   347 CLSDVLQHWQDSEFVAVYHRGRYFRL-WVYRAGRLLSPREIQFQIQR---ILDDPSPPSPGEEKL 407

  Fly   240 GDCVPTLSHDERSTWARNRNRLREISVANKETLLLVESACMEICWYEQ-------SPKD----YE 293
            |    .|:...|:.|||.|.:.....| ||::|..:|.|...:...:|       :|.:    |.
Zfish   408 G----ALTAGNRTPWARVRKQFFSSGV-NKQSLDCIEKAAFFVTLDDQAEGMKGENPSENLDRYA 467

  Fly   294 ESCQLGLYGDLHSRWADRSSSIIAFRNGRCNWTGEHSCYDGTV-------SISYATFMQLSF--- 348
            :|.   |:|..:.||.|:|.|::.::||:.....|||..|..:       :::..|| .|.:   
Zfish   468 KSL---LHGKCYDRWFDKSFSVVVYKNGKNGLNAEHSWADAPIVAHLWEFTLATDTF-HLGYNSD 528

  Fly   349 --------LEVPEP---DWAEAEKGNVLEVKELHFQLDDTLKNEIKRVQKDIDDRGIDVTVTFTA 402
                    ..:|.|   .|            ::.|::...:...:...|...|:  :|..|  ..
Zfish   529 GNCRGDVDHSLPHPQRLSW------------DIPFEVQTQISESLAVAQALADE--VDCHV--FP 577

  Fly   403 FDDYGKDFMKTHRLHPDSFVQVVMQWAYYQMHKEIAPTYETALMRQYYNGRTETLRSCTSAVAEF 467
            |..:||..:|..:|.||||||:.:|.|||:.......|||.::.|.:..|||||:|||::....|
Zfish   578 FRKFGKGLIKKMKLSPDSFVQLALQLAYYRDRGTFCLTYEASMTRLFREGRTETVRSCSNESCAF 642

  Fly   468 LRASSNKQVGDMSLAR-AFRRAVDEHKHFMNEARKGHGIDRHLFGLWCAA----YES-------- 519
            :.|....:  |....| ..|:..::|::....|..|.|||||||.|:..:    .||        
Zfish   643 VLALEGGE--DREQCRKLLRKTAEKHQNLYRLAMTGSGIDRHLFCLYVVSKYLGVESPFLKEVLS 705

  Fly   520 -------------KMDIPAFYDDPMYTKSGGGGNFVLSSSTLGFTANVGFVAPMVFDGYGVFYSI 571
                         :|::....:.|.:...|||                  ..|:..|||||.|.|
Zfish   706 EPWRLSTSQTPVQQMELFDLVNHPEFISLGGG------------------FGPVADDGYGVSYII 752

  Fly   572 TSEAVFINTTAYRDSLK-TSARKF 594
            ..|.:.....:.:.|.| |.:.||
Zfish   753 MGEDMINFHVSCKHSCKETDSHKF 776

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CROTNP_001334704.1 None
cpt1a2bXP_021329867.1 CPT_N 1..46 CDD:318644
HAUS5 <75..237 CDD:317253 20/71 (28%)
Carn_acyltransf 171..784 CDD:307070 167/668 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D559299at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.920

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