DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CROT and CROT

DIOPT Version :9

Sequence 1:NP_001334704.1 Gene:CROT / 43332 FlyBaseID:FBgn0039543 Length:618 Species:Drosophila melanogaster
Sequence 2:NP_001137407.1 Gene:CROT / 54677 HGNCID:2366 Length:640 Species:Homo sapiens


Alignment Length:645 Identity:195/645 - (30%)
Similarity:326/645 - (50%) Gaps:79/645 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 DKNTFDFDETLPSLPLPELRDTMERYY-----SC-----------------------IQPFGTKE 49
            ::.||.:.::|||||:|.|.:::::|.     :|                       ::||..:|
Human    10 EERTFQYQDSLPSLPVPSLEESLKKYLESVTRTCYQIRGLDPDAKRGFLDLTREGIQVKPFANQE 74

  Fly    50 ELAQARKTIDEFQNGVGAQLHEQLKKRAAGMRNWLGTWWEDYGYHLIRMPLLPYQLMVMPSQLEM 114
            |..:..:.:.:||:|:|.:||::|.:||.|.||||..||.:..|..:|          :||||.:
Human    75 EYKKTEEIVQKFQSGIGEKLHQKLLERAKGKRNWLEEWWLNVAYLDVR----------IPSQLNV 129

  Fly   115 --VGV--------PETPEYMLKSLARHIHHSLEFWDLTRKSSI-------KPLSSNGGKIKYSSA 162
              .|.        |......|:..:..:.|:|.:|.|.||..:       .||..|         
Human   130 NFAGPAAHFEHYWPPKEGTQLERGSITLWHNLNYWQLLRKEKVPVHKVGNTPLDMN--------- 185

  Fly   163 LYKHFFSTCRVPGEEQDHIEKHFLTKDEGKTPSHMLISGKGRQFIFDCVHEDDTILSAPEILVAL 227
            .::..||||:|||..:|.|..:|.|:.||::|:|:::..:||.|:||.:|| ..:::.||:|..|
Human   186 QFRMLFSTCKVPGITRDSIMNYFRTESEGRSPNHIVVLCRGRAFVFDVIHE-GCLVTPPELLRQL 249

  Fly   228 QRVRSILDYEPLGDCVPTLSHDERSTWARNRNRLREISVANKETLLLVESACMEICWYEQS---- 288
            ..:......||.|..:..|:.:||:.||:.|..|..:...|...|..::|:.:.....:.|    
Human   250 TYIHKKCHSEPDGPGIAALTSEERTRWAKAREYLIGLDPENLALLEKIQSSLLVYSMEDSSPHVT 314

  Fly   289 PKDYEESCQLGLYGDLHSRWADRSSSIIAFRNGRCNWTGEHSCYDGTVSISYATFMQLSFLEVPE 353
            |:||.|.....|.||...||.|:|.::|:|.||......:|:.:|..:.::.:.::.....: .|
Human   315 PEDYSEIIAAILIGDPTVRWGDKSYNLISFSNGVFGCNCDHAPFDAMIMVNISYYVDEKIFQ-NE 378

  Fly   354 PDWAEAEKGNVLEV-KELHFQLDDTLKNEIKRVQKDIDDRGIDVTVTFTAFDDYGKDFMKTHRLH 417
            ..|..:||...:.: :||.|.:|:.:.|:|.:.:........|:.:...||..:||...|...||
Human   379 GRWKGSEKVRDIPLPEELIFIVDEKVLNDINQAKAQYLREASDLQIAAYAFTSFGKKLTKNKMLH 443

  Fly   418 PDSFVQVVMQWAYYQMHKEIAPTYETALMRQYYNGRTETLRSCTSAVAEFLRASSNKQVGDMSLA 482
            ||:|:|:.:|.|||::|......||||:.|.:|:|||||:||||.....:.::..:..|......
Human   444 PDTFIQLALQLAYYRLHGHPGCCYETAMTRHFYHGRTETMRSCTVEAVRWCQSMQDPSVNLRERQ 508

  Fly   483 RAFRRAVDEHKHFMNEARKGHGIDRHLFGLWCAAYESKMDIPAFYDDPMYTKSGGGGNFVLSSST 547
            :...:|..:|...|.:...|.|.||||.||...|.|..:.:|..:.||:::|||||||||||:|.
Human   509 QKMLQAFAKHNKMMKDCSAGKGFDRHLLGLLLIAKEEGLPVPELFTDPLFSKSGGGGNFVLSTSL 573

  Fly   548 LGFTANVGFVAPMVFDGYGVFYSITSEAVFINTTAYRDSLKTSARK--------FNDIFK 599
            :|:....|.|.|||.:|||.||.|..:...:..:|::...:|.|.|        |:|:.:
Human   574 VGYLRVQGVVVPMVHNGYGFFYHIRDDRFVVACSAWKSCPETDAEKLVQLTFCAFHDMIQ 633

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CROTNP_001334704.1 None
CROTNP_001137407.1 Carn_acyltransf 20..631 CDD:279140 193/635 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165158998
Domainoid 1 1.000 342 1.000 Domainoid score I1078
eggNOG 1 0.900 - - E1_KOG3718
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H10899
Inparanoid 1 1.050 350 1.000 Inparanoid score I2284
Isobase 1 0.950 - 0 Normalized mean entropy S2491
OMA 1 1.010 - - QHG49249
OrthoDB 1 1.010 - - D167256at33208
OrthoFinder 1 1.000 - - FOG0006330
OrthoInspector 1 1.000 - - oto89227
orthoMCL 1 0.900 - - OOG6_107213
Panther 1 1.100 - - LDO PTHR22589
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X4606
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
1615.720

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