DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CROT and ChAT

DIOPT Version :9

Sequence 1:NP_001334704.1 Gene:CROT / 43332 FlyBaseID:FBgn0039543 Length:618 Species:Drosophila melanogaster
Sequence 2:NP_477004.5 Gene:ChAT / 42249 FlyBaseID:FBgn0000303 Length:721 Species:Drosophila melanogaster


Alignment Length:689 Identity:174/689 - (25%)
Similarity:292/689 - (42%) Gaps:125/689 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 YFMSKDDKNTFDFDETLPSLPLPELRDTMERYYSCIQPFGTKEELAQARKTIDEFQ--NGVGAQL 69
            :..:.:..:.|.|.:|||.:|:|.|.:||..|...::|..|..:|.:.::.|.:|.  .|:||:|
  Fly    72 WLSTAESVDEFGFPDTLPKVPVPALDETMADYIRALEPITTPAQLERTKELIRQFSAPQGIGARL 136

  Fly    70 HEQLKKRAAGMRNWLGTWWEDYGYHLIRMPLLPYQL---MVMPSQLEMVGVPETPEYMLKSLARH 131
            |:.|..:.....||...:|.:..|..||:| ||...   ||.|.: ....|.:...:..:.|...
  Fly   137 HQYLLDKREAEDNWAYYYWLNEMYMDIRIP-LPINSNPGMVFPPR-RFKTVHDVAHFAARLLDGI 199

  Fly   132 IHHSLEFWDLTRKSSIKPLSSNGGKIK---YSSALYKHFFSTCRVPGEEQDHIEKHFLTKDEGKT 193
            :.|. |..|    |...||.....:.|   ...|.|.....:||.||.:||   ..||       
  Fly   200 LSHR-EMLD----SGELPLERAASREKNQPLCMAQYYRLLGSCRRPGVKQD---SQFL------- 249

  Fly   194 PSHMLISGKGRQFIFDCVHE---------DDTILSAPEILVALQRVRSILDYEPLGDCVPT---- 245
            ||...::.:.|..:..|.::         |...||..||   ..::..:|...|   |:|.    
  Fly   250 PSRERLNDEDRHVVVICRNQMYCVVLQASDRGKLSESEI---ASQILYVLSDAP---CLPAKPVP 308

  Fly   246 ---LSHDERSTWARNRNRLREISVANKETLLLVESACMEICWYEQSPKDYEESCQLGLYGDLH-- 305
               |:.:.||||||:|..|:| ...|:..|.|:|:|.:.:|..|....::......|....:|  
  Fly   309 VGLLTAEPRSTWARDREMLQE-DERNQRNLELIETAQVVLCLDEPLAGNFNARGFTGATPTVHRA 372

  Fly   306 -----------------------SRWADRSSSIIAFRNGRCNWTGEHSCYDGTVSISYATFMQLS 347
                                   :||.|::..:|...:|......||||.:|   |:....::..
  Fly   373 GDRDETNMAHEMIHGGGSEYNSGNRWFDKTMQLIICTDGTWGLCYEHSCSEG---IAVVQLLEKI 434

  Fly   348 FLEVPE-PDWAEAEKGNVL--------EVKELHF--QLDDTLKNEIKRVQKDIDDRGIDVTVTFT 401
            :.::.| ||     :.|.|        |..|.|.  ||........|.|.|.|||  :|..|  .
  Fly   435 YKKIEEHPD-----EDNGLPQHHLPPPERLEWHVGPQLQLRFAQASKSVDKCIDD--LDFYV--Y 490

  Fly   402 AFDDYGKDFMKTHRLHPDSFVQVVMQWAYYQMHKEIAPTYETALMRQYYNGRTETLRSCTSAVAE 466
            .:..|||.|:|:.::.||.::|:.:|.|:|:::..:..|||:|..|::.:||.:.:|:.::...|
  Fly   491 RYQSYGKTFIKSCQVSPDVYIQLALQLAHYKLYGRLVATYESASTRRFLHGRVDCIRAASTEALE 555

  Fly   467 FLRA-----------SSNKQVGDMS------------LARAFRRAVDEHKHFMNEARKGHGIDRH 508
            :.:|           .|:::..:.|            |...||.||......|.:...|:|||..
  Fly   556 WAKAMCQGEGANVPLESDREDEEESRKVKFSIYSKDHLRELFRCAVARQTEVMVKNILGNGIDIP 620

  Fly   509 LFGLWCAAYESKMDIPAFYDDPMYTKSGGGGNFVLSSSTLGFTAN--VGFVAPMVFDGYGVFYSI 571
            |.||..|:.|...::...:.|..|..|   ..|:||:|.:..:.:  :|: .|:...|||..|:.
  Fly   621 LLGLREASIEVTGEMHELFKDESYIIS---QCFLLSTSQVACSTDSFMGY-GPVTPRGYGCSYNP 681

  Fly   572 TSEAVFINTTAYRDSLKTSARKFNDIFKDSFRRISVLLE 610
            ..|.:....:|:.....|||.::....:||...:..||:
  Fly   682 HPEQIVFCVSAFYSCEDTSASRYAKSLQDSLDIMRDLLQ 720

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CROTNP_001334704.1 None
ChATNP_477004.5 Carn_acyltransf 88..716 CDD:279140 169/667 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45469039
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D167256at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR22589
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.950

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