DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CROT and CPT2

DIOPT Version :9

Sequence 1:NP_001334704.1 Gene:CROT / 43332 FlyBaseID:FBgn0039543 Length:618 Species:Drosophila melanogaster
Sequence 2:NP_647756.1 Gene:CPT2 / 38355 FlyBaseID:FBgn0035383 Length:667 Species:Drosophila melanogaster


Alignment Length:672 Identity:176/672 - (26%)
Similarity:292/672 - (43%) Gaps:112/672 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 TFDFDETLPSLPLPELRDTMERYYSCIQPFGTKEELAQARKTIDEFQNGVGAQLHEQLKKRAAGM 80
            |..|..:||.||:|.|.::..|:....:|..:..|.||.::|:::|:.|:|.:||.:||...|..
  Fly    38 TLYFQRSLPRLPIPLLENSCRRFLEATKPLLSPAEQAQTQQTVEQFRQGIGMELHAKLKSHDAEN 102

  Fly    81 R--NWLGTWWEDYGYHLIRMPL-LPYQ-LMVMPSQLEMVGVPETPEYMLKSL--ARHIHHSLEFW 139
            :  :::...|.|. |...|.|| |.|. |:||.|...       |||..:.:  ...|..||.||
  Fly   103 KHTSYISQPWFDM-YLADRAPLPLNYNPLLVMKSDAR-------PEYQQQVVRATNLIISSLRFW 159

  Fly   140 DLTRKSSIKP--LSSNGGK-----------------IKYSSALYKHF----------FSTCRVPG 175
            ...:...::|  ...|..|                 ..|:|..:|.|          |.|.|:|.
  Fly   160 RSLQADLLEPEVYHMNAKKSDTSSYRRWMKVAPKAFATYASYAFKAFPLDMSQYNRLFGTSRIPR 224

  Fly   176 EEQDHIEKHFLTKDEGKTPSHMLISGKGRQFIFDCVHEDDTILSAPEILVALQRVRSILDYE--- 237
            ..:|.:.       :.....|:|:..:|..:..: |.:....:.:|.::  |.|:|::|..:   
  Fly   225 IGKDELV-------QSPDAKHILVMRRGHMYAVN-VLDSSGYIESPSVI--LGRLRAVLKLDADR 279

  Fly   238 -----PLGDCVPTLSHDERSTWARNRNRLREISVAN-KETLLL---VESACMEICWYEQSPKDYE 293
                 |||    .|:..:|..||:.|...    |:| |...||   |::|...:|...:....:.
  Fly   280 EAASVPLG----VLTSGQRDEWAKTRQHF----VSNTKNADLLEREVDAALFCVCLDGEEDGVFN 336

  Fly   294 ESCQLGLY-----GDLHSRWADRSSSIIAFRNGRCNWTGEHSCYDGTVSISYATFMQLSFLEVP- 352
            |:.|..|.     |...:||.|:|.|::...:|......|||..||...:.|...:....|:.| 
  Fly   337 ENQQEPLLKHLLAGKAQNRWFDKSISLLISADGTTAINFEHSWGDGVAVLRYFNELYKDTLKQPF 401

  Fly   353 ---EPDWAEAEKGNVLEVKELHFQLDDTLKNEIKRVQKD----IDDRGIDVTVTFTAFDDYGKDF 410
               |.....|| |:...|:.::|::||..|:.:......    :|:  :|:.|  ..:....|..
  Fly   402 VSTETVHTPAE-GDFSNVRPINFEIDDATKSAVSEAYNKNASIVDN--LDMNV--LKYPHINKPT 461

  Fly   411 MKTHRLHPDSFVQVVMQWAYYQMHKEIAPTYETALMRQYYNGRTETLRSCTSAVAEFLRA----- 470
            .|.:.|.|||.:|:..|.||.|.:.....:||:.....:.:|||||:|.||:|..:|..|     
  Fly   462 CKQYGLSPDSIIQLSFQLAYRQAYSGYVGSYESCSTSAFRHGRTETMRPCTNATRDFCEAILQPE 526

  Fly   471 SSNKQVGDMSLARAFRRAVDE----HKHFMNEARKGHGIDRHLFGLWCAAYESKMDIPAFYDDPM 531
            .|....|::      |..:|.    |.....||..|.|.|||||.|...|.:..:.||..|:...
  Fly   527 RSKPSAGEL------RAMIDNCSKVHGQLTKEAAMGQGFDRHLFALRHTAQKEGIPIPDLYETEA 585

  Fly   532 YTKSGGGGNFVLSSSTLGFTANV-GFVAPMVFDGYGVFYSITSEAVFINTTAYRDSLKTSARKFN 595
            |.:.   .|.::|:||||..|.: |...|:|.:|:|:.|||.::......|.|::  :...:.|.
  Fly   586 YKRI---NNNIISTSTLGSDALLAGSFGPVVKNGFGIGYSIQNDFAGAIVTTYKN--QADGKVFI 645

  Fly   596 DIFKDSFRRISVLLEQLAKESK 617
            |..:.:|.:|..:::|.:...|
  Fly   646 DSLESAFDKICAVIQQSSSSKK 667

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CROTNP_001334704.1 None
CPT2NP_647756.1 Carn_acyltransf 45..655 CDD:279140 171/651 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45469038
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D167256at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR22589
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.950

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