DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CROT and CG5122

DIOPT Version :10

Sequence 1:NP_733230.1 Gene:CROT / 43332 FlyBaseID:FBgn0039543 Length:618 Species:Drosophila melanogaster
Sequence 2:NP_609601.1 Gene:CG5122 / 34703 FlyBaseID:FBgn0032471 Length:1263 Species:Drosophila melanogaster


Alignment Length:623 Identity:175/623 - (28%)
Similarity:291/623 - (46%) Gaps:57/623 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 SKDDKNTFDFDETLPSLPLPELRDTMERYYSCIQPFGTKEELAQARKTIDEFQNGVGAQLHEQLK 74
            :.:|.|.....:..|:||   |:.::..|.|.|:||..:|||...:|...:|.:..||:|.:.|:
  Fly   655 ANNDPNKKPELKKFPALP---LKQSIASYLSSIEPFLNEEELKVEQKVAKKFVDNEGAKLQQLLE 716

  Fly    75 KRAAGMRNWLGTWWEDYGYHLIRMPLLPYQL--MVMPSQLEMVGVPETPEYMLKSLARHIHHSLE 137
            :.|.|..|||...|....|...:.||..:..  :..|.|    ...:|.:: |...|:.|:...|
  Fly   717 EEAEGTDNWLTPRWTRSAYLTYQAPLTVFSSPGLSFPIQ----EFKDTNDF-LNFTAKAIYGMCE 776

  Fly   138 FWDLTRKSSIKPLSSNGGKIKYSSALYKHFFSTCRVPGEEQDHIEKHFLTKDEGKTPSHMLISGK 202
            |..|..::.|..:..  ||.:..::.:...|.|.|.||...|.||::       ....::::...
  Fly   777 FKQLVDQNKIPVVQM--GKHQLDNSQFGKIFGTVRKPGRFCDTIEQY-------NDADYIVVVYN 832

  Fly   203 GRQFIFDCVHEDDTILSAPEILVALQRVRSILDYE-PLGDCVPTLSHDERSTWARNRNRLREISV 266
            ...|......:...:|.|..:..|||   .||:.. .:|.....|:||.||.||.....|.. ..
  Fly   833 NNYFKLPIYSQSGALLHAHTLRDALQ---DILECPIKVGKHFGLLTHDNRSNWAEAYTVLCR-PH 893

  Fly   267 ANKETLLLVESA----CMEICWYEQSPKDYEESCQL-------GLYGDLHSRWADRSSSIIAFRN 320
            .|.:|:..:|.:    |::.|  ..:||..|...|.       |:..:..:||.|::..:|...|
  Fly   894 GNADTVETIEQSLFVVCLDNC--VPTPKGEERIVQAHQLLHGGGVRQNSANRWMDKTIQLIVNPN 956

  Fly   321 GRCNWTGEHSCYDGTVSISYATFMQLSFLEVPEPDW----AEAEK---GNVLEVKELHFQLDDTL 378
            |...:..|||..|.........|:|   |:|.||::    .||:|   .|:|:.:.::..::..|
  Fly   957 GLAGFCYEHSPADCQPLAMLMDFVQ---LKVTEPNYGCEGCEADKKVTSNLLKFQPVNECINLWL 1018

  Fly   379 KNEIKRVQKDIDDRGIDVTVTFTAFDDYGKDFMKTHRLHPDSFVQVVMQWAYYQMHKEIAPTYET 443
            ....:.:|:.:....::|    ..|:.|||.|:|...|:|||::|:.:..|||.|:.:|...||:
  Fly  1019 CQARRNIQRIVSQLQMNV----INFECYGKCFIKAQGLNPDSYIQMALSLAYYSMYGKIPAQYES 1079

  Fly   444 ALMRQYYNGRTETLRSCTSAVAEFLRASSNKQVGDMSLARAFRRAVDEHKHFMNEARKGHGIDRH 508
            |.:|.::.|||||:||.::....||.|..:::........|.::|||.|:..:.||..|.|||||
  Fly  1080 AHLRIFHEGRTETIRSTSNESKTFLLAMQSEKASMSEKLAALQKAVDAHEKLIKEAINGQGIDRH 1144

  Fly   509 LFGLWCAAYESKMDIPAFYDDPMYTKSGGGGNFVLSSSTLGFTANVGFVA--PMVFDGYGVFYSI 571
            ||||...|.|..|.||.|:....|.:|   ..|.|.:|.:. |:|.||:|  |::.|||||.|:.
  Fly  1145 LFGLQEMALEKGMPIPEFFRSKGYVRS---VTFQLFTSQVA-TSNEGFMAYGPLLSDGYGVCYNP 1205

  Fly   572 TSEAVFINTTAYRDSLKTSARKFNDIFKDSFRRISVLL 609
            ....:....:|::...:.:..:|....|.|...:..|:
  Fly  1206 KESKITFAISAWKSCKEINTIRFAKAIKKSLNDMRKLI 1243

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CROTNP_733230.1 Carn_acyltransf 26..594 CDD:459926 168/590 (28%)
CG5122NP_609601.1 PTZ00449 <299..668 CDD:185628 2/12 (17%)
Carn_acyltransf 672..1234 CDD:459926 168/595 (28%)

Return to query results.
Submit another query.