DRSC/TRiP Functional Genomics Resources

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Protein Alignment CROT and Cpt1b

DIOPT Version :10

Sequence 1:NP_733230.1 Gene:CROT / 43332 FlyBaseID:FBgn0039543 Length:618 Species:Drosophila melanogaster
Sequence 2:XP_006242242.1 Gene:Cpt1b / 25756 RGDID:2397 Length:775 Species:Rattus norvegicus


Alignment Length:659 Identity:175/659 - (26%)
Similarity:281/659 - (42%) Gaps:128/659 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 FDFDETLPSLPLPELRDTMERYYSCIQPFGTKEELAQARKTIDEFQNGVGAQLHEQLKKRAAGMR 81
            :.|..:||.||:|.:..|:.||...::|....|...:......|||:.:..:|.:.|..::....
  Rat   167 YSFQTSLPKLPVPSVPATIHRYLDSVRPLLDDEAYFRMESLAKEFQDKIAPRLQKYLVLKSWWAT 231

  Fly    82 NWLGTWWEDYGYHLIRMPLL---PYQLMVMPSQLEMVGVPETPEYMLKSLARHIHHSLEFWDLTR 143
            |::..|||:|.|...|.|::   .|..|      :.|.:..|.:...: |...:|..:.:.....
  Rat   232 NYVSDWWEEYVYLRGRSPIMVNSNYYAM------DFVLIKNTSQQAAR-LGNTVHAMIMYRRKLD 289

  Fly   144 KSSIKPLSSNGGKIKYSSALYKHFFSTCRVPGEEQDHIEKHFLTKDEGKTPSHMLISGKGRQFIF 208
            :..|||:.:. |.:...|...:..|:|.|:||:|.|.:: |.   .|.:   |:.:..||| |..
  Rat   290 REEIKPVMAL-GMVPMCSYQMERMFNTTRIPGKETDLLQ-HL---SESR---HVAVYHKGR-FFK 345

  Fly   209 DCVHEDDTILSAPEILVALQRVRSILD----YEPLGDCVPTLSHDERSTWARNRNRLREISVANK 269
            ..::|...:|...::.:..||   |||    .:|..:.:..|:...|..||..|.:... |..||
  Rat   346 VWLYEGSCLLKPRDLEMQFQR---ILDDTSPPQPGEEKLAALTAGGRVEWAEARQKFFS-SGKNK 406

  Fly   270 ETLLLVESACMEICWYEQS----PKDYEESCQLG----LYGDLHSRWADRSSSIIAFRNGRCNWT 326
            .:|..:|.|...:...|.|    |.| |.|..|.    |:|:.::||.|:|.::|:.:||:....
  Rat   407 MSLDTIERAAFFVALDEDSHCYNPDD-EASLSLYGKSLLHGNCYNRWFDKSFTLISCKNGQLGLN 470

  Fly   327 GEHSCYDGTV-------SISYATFMQLSFLE----VPEPD----------WAEAEKGNVLEVKEL 370
            .|||..|..:       .::..|| .|.:.|    |.||:          |         ::.| 
  Rat   471 TEHSWADAPIIGHLWEFVLATDTF-HLGYTETGHCVGEPNTKLPPPQRMQW---------DIPE- 524

  Fly   371 HFQLDDTLKNEIKRVQKDIDDRGIDVTVTFTAFDDYGKDFMKTHRLHPDSFVQVVMQWAYYQMHK 435
              |....::|.. :|.|.:.|   ||.:....|..:||..:|..|..||:|||:.:|.|:::...
  Rat   525 --QCQTAIENSY-QVAKALAD---DVELYCFQFLPFGKGLIKKCRTSPDAFVQIALQLAHFRDKG 583

  Fly   436 EIAPTYETALMRQYYNGRTETLRSCTSAVAEFLRASSNKQVGDMSLARAFRRAVDEHKHFMNEAR 500
            :...|||.::.|.:..|||||:|||||....|:||..........|...||:|.::|::....|.
  Rat   584 KFCLTYEASMTRMFREGRTETVRSCTSESTAFVRAMMTGSHKKQDLQDLFRKASEKHQNMYRLAM 648

  Fly   501 KGHGIDRHLFGLWCAAYE------------------SKMDIPAF----YDDPMYTKS-GGGGNFV 542
            .|.|||||||.|:..:..                  |...||.|    :|...|... |.||.| 
  Rat   649 TGAGIDRHLFCLYIVSKYLGVRSPFLDEVLSEPWSLSTSQIPQFQICMFDPKQYPNHLGAGGGF- 712

  Fly   543 LSSSTLGFTANVGFVAPMVFDGYGVFYSITSE-AVFINTTAYRDSLKT---SARKFN-------- 595
                           .|:...||||.|.|..| .:|.:.::...|.:|   :|.:|.        
  Rat   713 ---------------GPVADHGYGVSYMIAGENTMFFHVSSKLSSSETFPQNALRFGNHIRQALL 762

  Fly   596 ---DIFKDS 601
               |:||.|
  Rat   763 DIADLFKIS 771

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CROTNP_733230.1 Carn_acyltransf 26..594 CDD:459926 167/630 (27%)
Cpt1bXP_006242242.1 CPT_N 1..47 CDD:465132
Carn_acyltransf 176..759 CDD:459926 168/636 (26%)
Blue background indicates that the domain is not in the aligned region.

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