DRSC/TRiP Functional Genomics Resources

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Protein Alignment CROT and cha-1

DIOPT Version :9

Sequence 1:NP_001334704.1 Gene:CROT / 43332 FlyBaseID:FBgn0039543 Length:618 Species:Drosophila melanogaster
Sequence 2:NP_001023603.1 Gene:cha-1 / 24105307 WormBaseID:WBGene00000481 Length:627 Species:Caenorhabditis elegans


Alignment Length:663 Identity:152/663 - (22%)
Similarity:270/663 - (40%) Gaps:125/663 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 FDETLPSLPLPELRDTMERY--YSCIQPFGTKEELAQARKTIDEFQNGVGAQLHEQLKKRAAGMR 81
            ::..||..|:|.|..|::||  |:.:...|.|..||.......:|.. ....|.|||.:.|....
 Worm    16 YETALPKPPVPSLEATLDRYLEYAAVVAVGQKASLATTHDAAHKFVR-QATPLQEQLLEIAEKSP 79

  Fly    82 NWLGTWWEDYGYHLIRMPLLPYQLMVMPSQLEMVGVPETPEYM-----LKSLARHIHHS------ 135
            ||...:|....|..:|||               ..|...|.|:     .::...||.::      
 Worm    80 NWATKFWLPEMYMRVRMP---------------TPVNSNPGYIFPKVKFETKEDHIKYTALLTRG 129

  Fly   136 -LEFWDL-TRKSSIKPLSSNGGKIKYSSALYKHFFSTCRVPGEEQDHIEKHFLTKDEGKTPSHML 198
             ||:.:| ..|...:..|:...|::.....|....|..|.||..:|...:...|.|..:   |:|
 Worm   130 LLEYKNLIDTKQVCREKSTGAQKLQMCMEQYDRVLSCYREPGVGEDTQIRKQKTNDGNE---HVL 191

  Fly   199 ISGKGRQFIFDCVHE--DDTILSAPEILVALQRVRSILDYEPLGDCVPTLSHDERSTWARNRNRL 261
            :..:.:.|:   :|.  :..::|..::...|.::..|...                    |:|..
 Worm   192 VMCRNQTFL---LHSRINGALVSYADVEYQLAQIEEISKI--------------------NQNNT 233

  Fly   262 REISVA--------------------NKETLLLVESACMEICWYEQSPKDYEESCQLGL------ 300
            ..|..:                    |.::...|:||...:|...:.|.||.::..:.:      
 Worm   234 ANIGASGVGPRDNAALFWQDMLTVEQNSKSYEWVKSALFVVCLDMEDPIDYGKNDTMSISEKEKE 298

  Fly   301 -----YGDL--H-------SRWADRSSSIIAFRNGRCNWTGEHSCYDGTVSISYA----TFMQLS 347
                 |..|  |       :||.|.:..::...:|......|||..:|.|.|:.|    .:.|..
 Worm   299 FVARGYSTLTGHGSSKFGLNRWYDATIQLVVSSSGVNGLCIEHSTAEGIVIINMAETAIRYAQKY 363

  Fly   348 FLEVPEPDWAEAEKGNVLEVKELHFQLDDTLKNEIKRVQKDIDDRGIDVTVTFTAFDDYGKDFMK 412
            |..  :..|.:...   :..|.|.:...:..:|.:|:..:..|:...::.:....|:::|||.:|
 Worm   364 FKS--KMVWNDVRN---VHPKSLTWHFSENSRNILKKQAEVFDELANELELEVLIFNEFGKDSIK 423

  Fly   413 THRLHPDSFVQVVMQWAYYQMHKEIAPTYETALMRQYYNGRTETLRSCTSAVAEFLRASSNKQVG 477
            ..|:.||.|:|::||.|:|:.|..:..|||:|.:|::..||.:.:|:.|....|::.|.::|:..
 Worm   424 NWRVSPDGFIQLIMQLAHYKTHGHLVSTYESASVRRFGAGRVDNIRANTQEALEWVTAMASKKES 488

  Fly   478 DMSLARAFRRAVDEHKHFMNEARKGHGIDRHLFGLWCAAYESK----MDIPAFYDDPMYTKSGGG 538
            .......|::||.:......|...|:|:|.||..|:|.|.|.:    .|||:.:.||::::.   
 Worm   489 KERKLELFKKAVLKQVKVTLENISGYGVDNHLCALFCLAREREETTGEDIPSLFLDPLWSEV--- 550

  Fly   539 GNFVLSSSTLGFTANV-------GFVAPMVFDGYGVFYSITSEAVFINTTAYRDSLKTSARKFND 596
            ..|.||:|.:..:.::       |.|   |.||||..|:|..:.|....||:|...:|..:.|..
 Worm   551 MRFPLSTSQVTTSLDIPDCYLTYGAV---VRDGYGCPYNIQPDRVIFAPTAFRSDPRTDLQHFKK 612

  Fly   597 IFKDSFRRISVLL 609
            ....:.|.:..||
 Worm   613 SLAGAMRDVKELL 625

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CROTNP_001334704.1 None
cha-1NP_001023603.1 Carn_acyltransf 20..622 CDD:279140 150/654 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D167256at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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