DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CROT and cpt-3

DIOPT Version :9

Sequence 1:NP_001334704.1 Gene:CROT / 43332 FlyBaseID:FBgn0039543 Length:618 Species:Drosophila melanogaster
Sequence 2:NP_497498.2 Gene:cpt-3 / 190055 WormBaseID:WBGene00021703 Length:722 Species:Caenorhabditis elegans


Alignment Length:642 Identity:170/642 - (26%)
Similarity:280/642 - (43%) Gaps:96/642 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 DETLPSLPLPELRDTMERYYSCIQPFGTKEELAQARKTIDEFQNGVGAQLHEQLKKRAAGMRNWL 84
            |..|.:||||.|.||:.||...::...::||......|..:|.:..|..|     :|.|    ||
 Worm   125 DRLLSNLPLPRLEDTVTRYTDSMKFVISEEEHNNLIATSTQFLSHEGRTL-----QRFA----WL 180

  Fly    85 --------GTW-WEDYGYHLIRMPLLPYQLMVMPSQLEMVGVPETPEYMLKSLARHIH-HSLEFW 139
                    .|| ||.|.|:..|     |.|.::.|..:.|...|.....:..:||.:: .:|...
 Worm   181 LHLITDNYVTWFWEKYIYYAGR-----YPLPIISSTCQCVLYGEDDLTQVYQVARLLYIETLANL 240

  Fly   140 DLTRKSSIKPLSSNGGKIKYSSALYKHFFSTCRVPGEEQDHIEKHFLTKDEGKTPS-HMLISGKG 203
            .:.|:..   |:...|.:  |:..|::.::..||||.|.|:.        :...|| |.|:..||
 Worm   241 SVDRQDY---LAVGDGLM--STRHYRNIYNGSRVPGAEIDNF--------QWNPPSRHALVVHKG 292

  Fly   204 RQFIFDCVHEDDTILSAPEILVALQRVRSILDYEPLGDC-VPTLSHDERSTWARNRNRLREISVA 267
            ..:..|...||..:.|..|:...:..:.:..|......| :.:|:.|.|:.|::||.:....:..
 Worm   293 TWYKVDTCDEDGRLYSVNELAKIVSELTTRQDKSTGFLCKISSLTADRRTEWSKNRRKFFLNNAH 357

  Fly   268 NKETLLLVESACMEICWYEQSPKDYEESCQLGLY------GDLHSRWADRSSSIIAFRNGRCNWT 326
            ||:.|.::|:: ..:...:.:....|.|.::.:|      ||..:||.|::.:.....|||...|
 Worm   358 NKKLLEVIETS-QYVISMDTAKWGVETSDKMSVYMKDMLAGDGTNRWFDKTMNYAICANGRGGAT 421

  Fly   327 GEHSCYDGT-VSISYATFMQLSFLEVPEPDWAEA-------EKGNVLEVKE-LHFQLDDTLKNEI 382
            ||||..||. :......|:.|....:..|...|.       |..|.|::.| |.|::::.|:.|:
 Worm   422 GEHSPADGAEMDHVCENFLNLDKQILKSPSKEEQLEIAKLDEPSNYLKLAEKLEFEVEEGLEEEV 486

  Fly   383 KRVQKDIDDRGIDVTVTFTAFDDYGKDFMKTHRLHPDSFVQVVMQWAYYQMHKEIAPTYETALMR 447
            :|..:.......|:.|....|.|:||..:|...:.||.|||:.:|.||::...:...||||..:|
 Worm   487 ERCYEAHTKAVADLHVHSIIFLDFGKGRLKKCGISPDGFVQMAIQLAYFEDQGKFTQTYETGSIR 551

  Fly   448 QYYNGRTETLRSCTSA----VAEFLRASSNKQVGDMSLARAFRRAVDEHKHFMNEARKGHGIDRH 508
            .|.|.||||:|..|||    |...|..:|:||    :..:..:.|.:.|.:...|...|:|.|||
 Worm   552 FYANSRTETVRPVTSASCKLVCAMLDETSSKQ----TRRQLLKEACEVHVNNCKEVMLGNGFDRH 612

  Fly   509 LFGLWCAAYESKMDIPAFYDDPMYTKSGGGGNFVLSSSTLGFTANV------------------- 554
            ||.| |...:.     ..|:.|..       :|..|...|..|:|:                   
 Worm   613 LFVL-CVIAKG-----LGYNSPFL-------DFFSSQKWLLSTSNIPNMTNSIAEDTSVNNIMLG 664

  Fly   555 GFVAPMVFDGYGVFYSI-TSEAVFINTTAYRDSLKTSARKFNDIFKDSFRRISVLLE 610
            |....:..||||:.|.. .:.|:.::.|:|..|..|.:.:..:..|.:|.|::.|.:
 Worm   665 GSFGAVAQDGYGICYRFGGNHAILVHITSYHSSELTDSERIGNRLKSAFHRLAGLFD 721

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CROTNP_001334704.1 None
cpt-3NP_497498.2 Carn_acyltransf 128..716 CDD:376382 167/632 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D559299at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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