DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CROT and B0395.3

DIOPT Version :9

Sequence 1:NP_001334704.1 Gene:CROT / 43332 FlyBaseID:FBgn0039543 Length:618 Species:Drosophila melanogaster
Sequence 2:NP_510624.1 Gene:B0395.3 / 181682 WormBaseID:WBGene00007175 Length:614 Species:Caenorhabditis elegans


Alignment Length:624 Identity:158/624 - (25%)
Similarity:276/624 - (44%) Gaps:59/624 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 LPSLPLPELRDTMERYYSCIQPFGTKEELAQARKTIDEFQNGVGAQLHEQLKKRAAGMRNWLGTW 87
            ||.||.|:...|::.:....|...:|:|..:.::.:::|......:|.|.|:|||..:.|||..|
 Worm    22 LPKLPAPQPIKTLKHFLDFAQALQSKKEFQETKQIVNDFVVKDLPKLQELLQKRADALPNWLTPW 86

  Fly    88 WEDYGYHLIRMPLLPYQLMVMPSQLEMVGVPE----TPEYMLKSLARHIHHSLEFWDLTRKSSIK 148
            |.:..|...|.||   .::..|.    |..|:    |.|..|:..|:....::.|:...:.:.:|
 Worm    87 WLNIAYLAARTPL---PVVTSPG----VMFPKFDYNTEEGQLEYAAKISQAAVHFYLRAKNNQLK 144

  Fly   149 PLSSNGGKIKYSSALYKHFFSTCRVPGEEQDHIEKHFLTKDEGKTPSHMLISGKGRQFIFDCVHE 213
            |  ...||.....:.|:..|.|.|||....|.|.   ...|..:...|:|:...|..|....:..
 Worm   145 P--DMAGKSPLDMSQYQFLFGTTRVPKVGVDEIR---YGCDYKEKLQHILVIRNGHLFRVQVLDS 204

  Fly   214 DDTILSAPEILVALQRVRS---ILDYEPLGDCVPTLSHDERSTWARNRNRLREISVANKETLLLV 275
            ::..||...|...|.:|.|   ..:..|:|    .:|.|.|..||...:.|::.: .|.::|..|
 Worm   205 NEQPLSIFAITQQLAKVVSESQTPNPHPVG----IVSSDSRDKWANVYSSLKKDN-NNAKSLEAV 264

  Fly   276 ESACMEICWYEQS--PKDY---EESCQLGLYG-----DLHSRWADRSSSIIAFRNGRCNWTGEHS 330
            |.:...:|..:.|  |..|   :|..:..|:|     :..:||.|::...:...||....|.||:
 Worm   265 EKSLFVVCLDKASEPPVGYTEKDEQSRQALHGGGSKVNSSNRWFDKTIQFVIGTNGYTGMTYEHT 329

  Fly   331 CYDG-----TVSISYATFMQLSFLEVPEPDWAEAEKGNVLEVKELHFQLDDTLKNEIKRVQKDID 390
            ..:|     .:......|...:|:....|..:        .|:.|....|:.:...|.:..|::|
 Worm   330 PAEGPPVGALMDFICDQFDANTFITEGTPSNS--------PVQRLDISTDEEINKRIAKSSKNMD 386

  Fly   391 DRGIDVTVTFTAFDDYGKDFMKTHRLHPDSFVQVVMQWAYYQMHKEIAPTYETALMRQYYNGRTE 455
            ....|:.:....|..|||:|.|:.::.||||:|:..|.|:|::|..:.||||||.:|::..||||
 Worm   387 SIAEDLDIVAFTFKPYGKNFPKSSKISPDSFIQMAYQLAFYRIHSSLPPTYETATLRKFTEGRTE 451

  Fly   456 TLRSCTSAVAEFLRASSNKQVGDMS-LARAFRRAVDEHKHFMNEARKGHGIDRHLFGLWCAAYES 519
            .:||..:|.|.|::...:|....:| :..|...|.:.||.:..:.....|:||||......|.|:
 Worm   452 NIRSPNTAAASFVKKMVSKPPTPVSEIYDALVHATNSHKKYTMDCMDAAGMDRHLLAWKLIATEN 516

  Fly   520 KMDIPAFYDDPMYTKSGGGGNFVLSSSTLGFTANVGFV----APMVFDGYGVFYSITSEAVFINT 580
            .:..|..:...:|.:.   .:|.:|:|.:   ....|:    .|...|.||:.|:.....:....
 Worm   517 NLPTPEIFGSNIYQQL---NHFQVSTSQV---PTRHFIQMCFGPSALDCYGICYNPQETELHFMI 575

  Fly   581 TAYRDSLKTSARKFNDIFKDSFRRISVLLEQLAKE-SKL 618
            :.::....||::||....:.:...:..::.:..|| |||
 Worm   576 STFKSYGSTSSKKFAKELQKALIDMKSVINKATKEMSKL 614

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CROTNP_001334704.1 None
B0395.3NP_510624.1 Carn_acyltransf 22..601 CDD:376382 153/609 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D167256at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.920

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