DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CROT and cpt-6

DIOPT Version :10

Sequence 1:NP_733230.1 Gene:CROT / 43332 FlyBaseID:FBgn0039543 Length:618 Species:Drosophila melanogaster
Sequence 2:NP_504648.1 Gene:cpt-6 / 179035 WormBaseID:WBGene00020911 Length:746 Species:Caenorhabditis elegans


Alignment Length:656 Identity:162/656 - (24%)
Similarity:265/656 - (40%) Gaps:123/656 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 DETLPSLPLPELRDTMERYYSCIQPFGTKEELAQARKTIDEFQNGVGAQLHEQLKKRAAGMRNWL 84
            |..|||||:|.|:||:..|...::...:::|.....|...||....|.:|.......:....|::
 Worm   145 DRLLPSLPVPALKDTISEYLDSMKHILSEQEYEIVAKQAHEFLENEGKKLQRYTWIYSLFTDNYV 209

  Fly    85 GTWWEDYGYHLIRMPLLPYQLMVMPSQLEMVGVPETPEYMLKSLARHIHHSLEFWDLTRKSS--- 146
            .::|:.|.|...|.||:                              |:.|:...||.|...   
 Worm   210 TSFWQKYAYLHGRYPLM------------------------------INSSVAHCDLLRDKEATR 244

  Fly   147 ---------IKPLSSNGGKIKYSSAL---------YKHFFSTCRVPGEEQDHIEKHFLTKDEGKT 193
                     |:.:|......:...||         ||:.::..|.||::.|.:..|.:.|     
 Worm   245 AHRAARVTWIEVMSHLAIDRQQYKALGDGLVCTRHYKNMYAVTREPGKKIDQLILHGIQK----- 304

  Fly   194 PSHMLISGKGRQFIFDCVHEDDTILSAPEILVALQRVRSILDYEP--LGDCVPTLSHDERSTWAR 256
              |:::..:|:.:....|.:.:.|.:..::......:.|..:.|.  :|. :..|:||.|.:|.|
 Worm   305 --HIVVVLRGKYYKIHVVDDKNNIYTVEQLTKIFHEMISRDEKEEGVIGK-IAALTHDTRDSWHR 366

  Fly   257 NRNRLREISVANKETLLLVESACMEICWYEQSPKDYEE-----------SCQLGLYGDLHSRWAD 310
            ||.:....:|.|.:.|..:|.|.......|.....|:|           :|   |.||..:||.|
 Worm   367 NRQKYFLGNVKNAQILKEIECAVFFFTLDENDDYGYDEKKPEVLSNFLANC---LSGDGTNRWVD 428

  Fly   311 RSSSIIAFRNGRCNWTGEHSCYDGT------VSISYATFMQLSFLEVPEPDWAEAEKGNVLEVKE 369
            :|.:.|..:|.||..|.|||..||.      .:..|.....|.:..:     .|.||..|:|..:
 Worm   429 KSLNYICSKNARCGGTTEHSIADGAEFDHIMENFVYVDLEVLKYKSI-----EEQEKMAVIEEND 488

  Fly   370 ---------LHFQL-DDTLKNEIKRVQKDIDDRGIDVTVTFTAFDDYGKDFMKTHRLHPDSFVQV 424
                     |:|:: |..:.:||.|..........|:.:...||.|:||..:|...:.||:|:|:
 Worm   489 KKSLKLATPLNFEVPDQEMLSEITRCYDAHQIAKNDLDLYALAFRDFGKGRIKKCGVSPDAFIQM 553

  Fly   425 VMQWAYYQMHKEIAPTYETALMRQYYNGRTETLRSCTSAVAEFLRASSNKQVGDMSLARAFRRAV 489
            .:|.|.|:...:...|||.|..|.:.|.||||||:......||:.|..|......:.....::|.
 Worm   554 AIQLANYRDQGKFVLTYEPASARFFANSRTETLRTVNDHSCEFVEAMLNANETKEAKIALLKKAC 618

  Fly   490 DEHKHFMNEARKGHGIDRHLFGLWCAAYESKMDIPAFYDDPMYTKSGGGGNFVLSSSTLGFTAN- 553
            :.|.....:...|.|:|||||.|:..:..:.:..| |.|:.:..|      :.||:|.:....| 
 Worm   619 ETHVLRNKKCMVGQGVDRHLFVLYILSQGTGIQSP-FLDNYINQK------WKLSTSHVPNVTNQ 676

  Fly   554 ---------------VGFVAPMVFDGYGVFYSI-TSEAVFINTTAYRDSLKTSARKFNDIFKDSF 602
                           .|.||.   ||||:.|.. .:..:|.|.|:|..:..|.:.||..:..:||
 Worm   677 CDEDTDSDNTWLGACFGAVAA---DGYGICYRFGGNHGIFANITSYHSAANTDSTKFAKLLSESF 738

  Fly   603 RRISVL 608
            ..:|.|
 Worm   739 HELSNL 744

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CROTNP_733230.1 Carn_acyltransf 26..594 CDD:459926 152/634 (24%)
cpt-6NP_504648.1 Carn_acyltransf 151..736 CDD:459926 154/640 (24%)

Return to query results.
Submit another query.