DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CROT and cpt-2

DIOPT Version :9

Sequence 1:NP_001334704.1 Gene:CROT / 43332 FlyBaseID:FBgn0039543 Length:618 Species:Drosophila melanogaster
Sequence 2:NP_001040977.2 Gene:cpt-2 / 178025 WormBaseID:WBGene00011122 Length:646 Species:Caenorhabditis elegans


Alignment Length:656 Identity:176/656 - (26%)
Similarity:285/656 - (43%) Gaps:113/656 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 FMSKDDKNTFDFDETLPSLPLPELRDTMERYYSCIQPFGTKEELAQARKTIDEFQNGVGAQLHEQ 72
            ::.|.:..::.|.::|..||:|:|.||:.||.:..:...:.:..|:...||..|:...|.:|.|.
 Worm    27 YLEKSEIPSYHFQKSLRRLPIPKLPDTVNRYLASSKAVLSPDVFAKTEATIRSFEANEGPKLQEA 91

  Fly    73 LKK--RAAGMRNWLGTWWEDYGYHLIRMPLL----PYQLMVMPSQLEMVGVPETPEY-------- 123
            |.:  :|....:::...|.|. |...|:|:.    |: :|..|.        ..|::        
 Worm    92 LLEYDKAHRDTSYISEPWFDM-YLRARVPVAVNYNPF-MMYAPD--------PNPKFNDQLTRAT 146

  Fly   124 -MLKSLARHIHHSL-------EFWDLTRKSS-----------IKPLSSNGGKIKYSS-----ALY 164
             :..|.|| |..||       |.:.:..|.|           :.|..|..|.:.:.:     :.|
 Worm   147 NLAISYAR-IKRSLDENLLGPEVFHMNPKKSDTKLFRTVCKTLPPSLSWFGAVAFKAFPLDMSQY 210

  Fly   165 KHFFSTCRVPGEEQDHI-----EKHFLTKDEGKTPSHMLISGKGRQF---IFDCVHEDDTILSAP 221
            |..|...|:|.:|:|.:     :|||:.            ..||..:   |||   :|..:|.|.
 Worm   211 KSLFCGSRIPKKEKDMLYLDASQKHFVA------------FYKGHPYAVRIFD---DDGKLLDAE 260

  Fly   222 EILVALQRVRSILDYEPLGDCVPTLSHDERSTWARNRNRLREISVANKETLLLVESACMEICWYE 286
            ::..:|..:.|..........:.:|:..:|.:||..|..|.  :..|.|.|..::.....||..:
 Worm   261 DVHASLAWILSNGKEAAPESSIGSLTSLDRDSWAEARVELE--NAGNGEYLKKIDGGLFAICLDD 323

  Fly   287 QSPKDYEESCQLGLYG-DLHSRWADRSSSIIAFRNGRCNWTGEHSCYDGTVSISYATFMQLSFLE 350
            ...::::...|..|.| |..:||.|:....|...||:.....|||..||   ::....|:.||.:
 Worm   324 LKTEEHKRLVQSLLIGDDARNRWFDKCFQTIIDANGQATINFEHSWGDG---VAVLRLMEESFKD 385

  Fly   351 VPE-----PDWAEAEKG-NVLEVKELHFQLDDTLKNEIKRVQKDIDDRGIDVTVTFTAFDDYGKD 409
            ..:     ||  :..|. |...|:.|.|:|.|:||::|...||.......|:......|:...:|
 Worm   386 TNKNHFVSPD--DTPKSHNPAHVQALEFKLTDSLKSKISDAQKKHVSANSDLDFATMEFEGLNRD 448

  Fly   410 FMKTHRLHPDSFVQVVMQWAYYQMHKEIAPTYETALMRQYYNGRTETLRSCTS-------AVAEF 467
            .:|..:|.|||.:|:.:|.|:|.::||..||||:.....:..||||.:||.||       |:.|.
 Worm   449 LIKKTKLSPDSVMQLAIQMAFYSLYKEFVPTYESCSTAAFLKGRTECMRSATSATRAATLAILEE 513

  Fly   468 LRASSNKQVGDMSLARAFRRAVDEHKHFMNEARKGHGIDRHLFGLWCAAYESKMDIPAFYDDPMY 532
            .|....:.:.|.|         .:|...:.||..|.|.||||.||...|.......|.|:.||.|
 Worm   514 NRKDVRQLLTDCS---------TQHFQLVKEASMGQGYDRHLLGLKITAQRLSQPTPDFFQDPGY 569

  Fly   533 TKSGGGGNFVLSSSTLGF-TANVGFVAPMVFDGYGVFYSITSE---AVFINTTAYRDSLKTSARK 593
            |:.   |:||||:|||.. |...|...|:|.||:|:.|::...   ||..:..:.||:...|   
 Worm   570 TRM---GHFVLSTSTLSTDTIVFGGFGPVVQDGFGIGYNVVPNKLGAVISSNKSKRDAAAFS--- 628

  Fly   594 FNDIFK 599
             |.::|
 Worm   629 -NALYK 633

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CROTNP_001334704.1 None
cpt-2NP_001040977.2 Carn_acyltransf 42..639 CDD:376382 174/641 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D167256at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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