DRSC/TRiP Functional Genomics Resources

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Protein Alignment CROT and cpt-1

DIOPT Version :10

Sequence 1:NP_733230.1 Gene:CROT / 43332 FlyBaseID:FBgn0039543 Length:618 Species:Drosophila melanogaster
Sequence 2:NP_496721.2 Gene:cpt-1 / 174912 WormBaseID:WBGene00012907 Length:779 Species:Caenorhabditis elegans


Alignment Length:648 Identity:174/648 - (26%)
Similarity:294/648 - (45%) Gaps:61/648 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 LYFMSKDDKNTFDFDETLPSLPLPELRDTMERYYSCIQPFGTKEELAQARKTIDEFQNGVGAQLH 70
            |:.:||.......|...||.||||.|.||:.::...::|..:.||..:.....:.|:.|||.:|.
 Worm   155 LHIISKAGPMLHSFQGALPRLPLPNLDDTVRKHLLSMKPILSDEEFQELEFLSERFRKGVGRRLQ 219

  Fly    71 EQLKKRAAGMRNWLGTWWEDYGYHLIRMPLLPYQLMVMPSQLEMVGVPETPEYMLKSLARHI-HH 134
            ..|..::....|::..|||::.|...|.|     :|:..:......:.|.|.....|.|.:: :.
 Worm   220 RYLTLKSWFSSNYVTDWWEEFVYMRQRSP-----IMINSNYYGFDTLNEHPTQNQASRAANLTYT 279

  Fly   135 SLEFWDLTRKSSIKPLS-SNGGKIKYSSALYKHFFSTCRVPGEEQDHIEKHFLTKDEGKTPSHML 198
            ||:|..:..:..:.|.| |...|:.:.:..|:..|:||||||||.|.:    |..|:.|   |:.
 Worm   280 SLQFRRMVDRQEVSPFSISPRTKVPFCTMQYERLFNTCRVPGEEVDRL----LHWDDAK---HIA 337

  Fly   199 ISGKGRQFIFDCVHEDDTILSAPEILVALQRVRSILDYEPLGDC-VPTLSHDERSTWARNRNRLR 262
            :..:|..|.. .||....:|.|.|:.|....:.:.......|:. :.:|:..||:.||:.| |..
 Worm   338 VYCRGVWFKL-IVHNGKRLLEACELQVQYDAILAHTHEPSEGEMHLASLTAGERADWAKTR-RAH 400

  Fly   263 EISVANKETLLLVESACM-------EICWYEQSPKDYEESCQLGLYGDLHSRWADRSSSIIAFRN 320
            ..|..||.:|..:|.|..       |..:..|.|...:......|:|..|.||.|:|.::|..:|
 Worm   401 FRSGVNKTSLNDIERAAFVVILDDEETHYDPQDPSKLDHWAHNLLHGKAHDRWFDKSFNLIISKN 465

  Fly   321 GRCNWTGEHSCYDGTVSISYATFMQLS---FLEVPEPDWAEAEKGNVLEVKELHFQLDDTLKNEI 382
            |......|||..|..|...:..:..|.   |:...|....:.|....|..:.|.:::.....::|
 Worm   466 GHVGINTEHSWGDAAVMAHFTEWSLLQDIVFIGYDENGRCKGEPKEKLTPERLKWEIPAPALDQI 530

  Fly   383 KRVQKDIDDRGIDVTVTFTAFDDYGKDFMKTHRLHPDSFVQVVMQWAYYQMHKEIAPTYETALMR 447
            ::..:..:....||.::...:.||||.|.|..::.||:|:|:.:|:.|::...:.:.|||.::.|
 Worm   531 RKSMEVANALIADVEMSLLVWTDYGKGFAKKLKVSPDAFLQMTLQYTYFKNQNKFSLTYEASMTR 595

  Fly   448 QYYNGRTETLRSCTSAVAEFLRASSNKQVGDMSLARAFRRAVDEHKHFMNEARKGHGIDRHLFGL 512
            .:..|||||:||||...::|:|:..:.........:..|:|.|:|:....:|..|.|:|||||.|
 Worm   596 LFREGRTETVRSCTVQSSDFVRSMLDASKTPQDRLQLLRKACDKHQELYRDAMCGQGVDRHLFAL 660

  Fly   513 WCAAYESKMDIPAFYDD---PMYTKSGGGGNFVLSSSTLG-------------------FTANVG 555
            :......:.:.| |:|:   |.|         :||:|...                   .||..|
 Worm   661 YVIKRYLEEESP-FFDNIFPPTY---------LLSTSQTPMNQCEADAKGLSNEVRLRLITAGGG 715

  Fly   556 FVAPMVFDGYGVFYSITSE-AVFINTTAYRDSLKTSARKFNDIFKDSFRRISVLLEQLAKESK 617
            | .|:...||||.|.:..| .:..:.::.|.:..||:|:|.:..|.|...:..|.|.:....|
 Worm   716 F-GPVADRGYGVSYIVAGEDTLSFHISSKRSADNTSSREFREELKRSLNDMKKLAEAIEAPKK 777

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CROTNP_733230.1 Carn_acyltransf 26..594 CDD:459926 162/603 (27%)
cpt-1NP_496721.2 CPT_N 1..47 CDD:465132
Carn_acyltransf 175..760 CDD:459926 163/609 (27%)
Blue background indicates that the domain is not in the aligned region.

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