DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CROT and Crat

DIOPT Version :10

Sequence 1:NP_733230.1 Gene:CROT / 43332 FlyBaseID:FBgn0039543 Length:618 Species:Drosophila melanogaster
Sequence 2:NP_001407005.1 Gene:Crat / 12908 MGIID:109501 Length:631 Species:Mus musculus


Alignment Length:625 Identity:170/625 - (27%)
Similarity:310/625 - (49%) Gaps:68/625 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 ETLPSLPLPELRDTMERYYSCIQPFGTKEELAQARKTIDEFQ--NGVGAQLHEQLKKRAAGMRNW 83
            :.||.||:|.|:.:::.|...:||..::||.|..::.:||||  .|||.:|.:.|::||..|.||
Mouse    33 DALPRLPVPPLQQSLDYYLKALQPIVSEEEWAHTKQLVDEFQTSGGVGERLQKGLERRAKKMENW 97

  Fly    84 LGTWWEDYGYHLIRMPLLPYQL--MVMPSQ--LEMVGVPETPEYMLKSLARHIHHSLEFWDLTRK 144
            |..||....|...|.|::.|..  :::|.|  :::.|       .|:..|:.|...|:|..:...
Mouse    98 LSEWWLKTAYLQFRQPVVIYSSPGVILPKQDFVDLQG-------QLRFAAKLIEGVLDFKSMIDN 155

  Fly   145 SSIKPLSSNGGKIKYSSALYKHFFSTCRVPGEEQDHIEKHFLTKDEGKTPSHMLISGKGRQFIFD 209
            .:: |:...||:....:..|: ..|:|||||.:||.:.....:|   :.|:|:.:....:.|..|
Mouse   156 ETL-PVEFLGGQPLCMNQYYQ-ILSSCRVPGPKQDSVVNFLKSK---RPPTHITVVHNYQFFELD 215

  Fly   210 CVHEDDTILSAPEILVALQRV-RSIL--DYEPLGDCVPTLSHDERSTWARNRNRLREISVANKET 271
            ..|.|.|.|::.:|.|.|::: .|.|  :.||:|    .|:.:.|:|||:..|.|.:..| |:|:
Mouse   216 VYHSDGTPLTSDQIFVQLEKIWNSSLQSNKEPVG----ILTSNHRNTWAKAYNNLIKDKV-NRES 275

  Fly   272 LLLVESACMEICWYEQSPKDYEESCQLGLYGD-LH---------SRWADRSSSIIAFRNGRCNWT 326
            :..::.:...:|..:|.|:..::..:..:.|. ||         :||.|::...|...:|.|...
Mouse   276 VNSIQKSIFTVCLDKQVPRVSDDVYRNHVAGQMLHGGGSKFNSGNRWFDKTLQFIVAEDGSCGMV 340

  Fly   327 GEHSCYDGTVSISYA----------TFMQLSFLEVPEPDWAEAEKGNVLEVKELHFQLDDTLKNE 381
            .||:..:|...::..          ..::...:.:|.|             |:|.|.:...:||:
Mouse   341 YEHAAAEGPPIVALVDHVMEYTKKPELVRSPMVPLPMP-------------KKLRFNITPEIKND 392

  Fly   382 IKRVQKDIDDRGIDVTVTFTAFDDYGKDFMKTHRLHPDSFVQVVMQWAYYQMHKEIAPTYETALM 446
            |::.::::.....|:.:....|..:||||.|:.:|.||:|:||.:|.|||:::.:...|||:|.:
Mouse   393 IEKAKQNLSIMIQDLDIMMLTFHHFGKDFPKSEKLSPDAFIQVALQLAYYRIYGQACATYESASL 457

  Fly   447 RQYYNGRTETLRSCTSAVAEFLRASSNKQVGDMSLARAFRRAVDEHKHFMN-----EARKGHGID 506
            |.::.|||:|:||.:.....|::...:..|.:.......|:||..|:.:.:     :|.:|...|
Mouse   458 RMFHLGRTDTIRSASIDSLAFVKGMGDSTVPEQQKVELLRKAVQAHRAYTDRISHPQAIRGEAFD 522

  Fly   507 RHLFGLWCAAYESKMDIPAFYDDPMYTKSGGGGNFVLSSSTL-GFTANVGFVAPMVFDGYGVFYS 570
            |||.||...|.|..:.:|..:.|..|..:   .:|.||:|.: ..|..|.|..|:|.||||:.|:
Mouse   523 RHLLGLKLQAIEDLVSMPDIFMDTSYAIA---MHFNLSTSQVPAKTDCVMFFGPVVPDGYGICYN 584

  Fly   571 ITSEAVFINTTAYRDSLKTSARKFNDIFKDSFRRISVLLE 610
            .....:..:.:||....:|:|.:.....:.:...:..||:
Mouse   585 PMEAHINFSVSAYNSCAETNAARMAHYLEKALLDMRTLLQ 624

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CROTNP_733230.1 Carn_acyltransf 26..594 CDD:459926 166/602 (28%)
CratNP_001407005.1 Carn_acyltransf 38..614 CDD:459926 166/608 (27%)
Microbody targeting signal. /evidence=ECO:0000255 629..631
Blue background indicates that the domain is not in the aligned region.

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