DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CROT and Cpt2

DIOPT Version :9

Sequence 1:NP_001334704.1 Gene:CROT / 43332 FlyBaseID:FBgn0039543 Length:618 Species:Drosophila melanogaster
Sequence 2:NP_034079.2 Gene:Cpt2 / 12896 MGIID:109176 Length:658 Species:Mus musculus


Alignment Length:637 Identity:166/637 - (26%)
Similarity:274/637 - (43%) Gaps:84/637 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 TFDFDETLPSLPLPELRDTMERYYSCIQPFGTKEELAQARKTIDEFQNGVGAQLHEQL---KKRA 77
            |..:.::||.||:|:|.|||:||.|..:|.....:..:......:|:||:|.:||..|   .|:.
Mouse    42 TMHYQDSLPRLPIPKLEDTMKRYLSAQKPLLNDSQFRKTEVLCKDFENGIGKELHAHLLAQDKQN 106

  Fly    78 AGMRNWLGTWWE-------------------------DYGYHLIRMPLLPYQLMVMPSQLEMVGV 117
            .......|.|::                         :|...|.|...|....:.....|. .|:
Mouse   107 KHTSYISGPWFDMYLTARDSVVLNFNPFMAFNPDPKSEYNDQLTRATNLTVSAVRFLKTLR-AGL 170

  Fly   118 PETPEYML----------KSLARHIHHSLEFWDLTRKSSIKPLSSNGGKIKYSSALYKHFFSTCR 172
            .|...:.|          |.|.|.:..||. |......:..||         ..:.|...|::.|
Mouse   171 LEPEVFHLNPARSDTDAFKRLIRFVPSSLS-WYGAYLVNAYPL---------DMSQYFRLFNSTR 225

  Fly   173 VPGEEQDHIEKHFLTKDEGKTPSHMLISGKGRQFIFDCVHEDDTILSAPEILVALQRVRSILDYE 237
            :|...:|.:    .|..:.:   |:|:..||..::||.:.:|..|::..||...|:.:.|  |..
Mouse   226 IPKPSRDEL----FTDTKAR---HLLVLRKGHFYVFDVLDQDGNIVNPSEIQAHLKYILS--DSS 281

  Fly   238 PLGDC-VPTLSHDERSTWARNRNRLREISVANKETLLLVESACMEICWYEQSPKDYEESCQLGLY 301
            |:.:. :..|:.:.|..||..|.:|  |...|:|||..|:||...:|..:...||........|:
Mouse   282 PVPEFPLAYLTSENRDVWAELRQKL--IHGGNEETLRKVDSAVFCLCLDDFPMKDLVHLSHTMLH 344

  Fly   302 GDLHSRWADRSSSIIAFRNGRCNWTGEHSCYDGTVSISYATFMQLSFLEVP--EPDWAEAEKGNV 364
            ||..:||.|:|.::|..::|......||:..||...:.:...:.....:.|  .|....|...:.
Mouse   345 GDGTNRWFDKSFNLIVAKDGTAAVHFEHAWGDGVAVLRFFNEVFRDSTQTPAIAPQSQPAATDSS 409

  Fly   365 LEVKELHFQLDDTLKNEIKRVQKDIDDRGIDVTVTFTAFDDYGKDFMKTHRLHPDSFVQVVMQWA 429
            :.|::|.|:|...||..:...::..|.....:|:....|...||:|:|..:|.||:..|:..|.|
Mouse   410 VSVQKLSFKLSSALKAGVTAAKEKFDATMKTLTIDAIQFQRGGKEFLKKKKLSPDAVAQLAFQMA 474

  Fly   430 YYQMHKEIAPTYETALMRQYYNGRTETLR-------SCTSAVAEFLRASSNKQVGDMSLARAFRR 487
            :.:.:.:...|||:.....:.:|||||:|       .|:.|   |:|..|...||:  |......
Mouse   475 FLRQYGQTVATYESCSTAAFKHGRTETIRPASIFTKRCSEA---FVREPSKHSVGE--LQHMMAE 534

  Fly   488 AVDEHKHFMNEARKGHGIDRHLFGLWCAAYESKMDIPAFYDDPMYTKSGGGGNFVLSSSTLGFTA 552
            ....|.....||..|.|.|||||.|...|....:.:|..|.||.|.:.   .:.:||:|||...|
Mouse   535 CSKYHGQLTKEAAMGQGFDRHLFALRYLAAARGVTLPELYQDPAYQRI---NHNILSTSTLSSPA 596

  Fly   553 -NVGFVAPMVFDGYGVFYSITSEAVFINTTAY-----RDSLKTSARKFNDIF 598
             ::|..||:|.||:|:.|::..:.:..|.::|     |:.|....:...|:|
Mouse   597 VSLGGFAPVVPDGFGIAYAVHDDWIGCNVSSYSGRNAREFLHCVQKCLEDMF 648

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CROTNP_001334704.1 None
Cpt2NP_034079.2 Carn_acyltransf 49..648 CDD:279140 164/628 (26%)
Coenzyme A binding. /evidence=ECO:0000250 452..464 5/11 (45%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D167256at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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