DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CROT and cpt2

DIOPT Version :9

Sequence 1:NP_001334704.1 Gene:CROT / 43332 FlyBaseID:FBgn0039543 Length:618 Species:Drosophila melanogaster
Sequence 2:NP_001007448.1 Gene:cpt2 / 100005717 ZFINID:ZDB-GENE-030131-6719 Length:668 Species:Danio rerio


Alignment Length:660 Identity:174/660 - (26%)
Similarity:281/660 - (42%) Gaps:102/660 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 DRASLYFMSKDDKNTFDFDETLPSLPLPELRDTMERYYSCIQPFGTKEELAQARKTIDEFQNGVG 66
            |.|...::.|....:..:.::||.||:|:|.||:.||.:..:|....|:.:...|...|||:|.|
Zfish    39 DGAGSEYLHKSIVPSMHYQKSLPRLPVPKLEDTIRRYLAAQRPLLNDEQYSNTEKLAQEFQSGAG 103

  Fly    67 AQLHEQL----KKRAAGMRNWLGTWWEDYGYHLIRMPLLPYQLMVMPSQLEMVGVPE-TPEY--M 124
            .||||:|    ||..  ..:::...|.|       |.|...:.:|:.....|...|: .|||  .
Zfish   104 KQLHEELVALDKKNK--HTSYISAPWFD-------MYLSARESIVLNFNPFMSFNPDPKPEYNDQ 159

  Fly   125 LKSLARHIHHSLEFWDLTRKSSIKP--LSSNGGKIKYSS-------------------------- 161
            |......:..::.|....|...::|  ...|..|....|                          
Zfish   160 LVRATNMVCSAVRFMKTLRAGLLEPEVFHLNPAKSDTDSFKKLIRWVPPSISWFGAYMVNAYPLD 224

  Fly   162 -ALYKHFFSTCRVPGEEQDHIEKHFLTKDEGKTPSHMLISGKGRQFIFDCVHEDDTILSAPEILV 225
             :.|...|::.|:|..::|.:    ||.|.|:   |:|:..:|..::||.:..|..::...|:..
Zfish   225 MSQYFRLFNSTRIPKYKRDEL----LTDDRGR---HLLVMKRGNLYVFDALDRDGNLIKPAEVQA 282

  Fly   226 ALQRVRSILDYE------PLGDCVPTLSHDERSTWARNRNRLREISVANKETLLLVESACMEICW 284
            .|   :.||:..      |||    .|:.:.|.||...|.:|  :...|.|.|.||::|...:|.
Zfish   283 HL---KYILEDPTQASAFPLG----VLTSENRDTWTGLRQKL--LDAGNGEALQLVDTALFCLCL 338

  Fly   285 YEQSPKDYEESCQLGLYGDLHSRWADRSSSIIAFRNGRCNWTGEHSCYDGTVSISYATFMQLSFL 349
            .|:..:|:.......|:||..:||.|:|.|:|..::|:.....|||..||   ::...|....|.
Zfish   339 DEEVLRDHIHISHNMLHGDGCNRWYDKSFSVILAKDGQAAINFEHSWGDG---VAVLRFQNEVFK 400

  Fly   350 EVPE-----PDWAEAEKGNVLEVKELHFQLDDTLKNEIKRVQKDIDDRGIDVTVTFTAFDDYGKD 409
            :..|     |....|...:...|:.|.|:|:|.||..|.:.:::.......:|:....|...||:
Zfish   401 DTTEKPLVGPGSQPASVDSSSAVRRLEFKLNDELKAGITKAKENFQAAVSKLTIDAMEFKKGGKE 465

  Fly   410 FMKTHRLHPDSFVQVVMQWAYYQMHKEIAPTYETALMRQYYNGRTETLR-------SCTSAVAEF 467
            .:|..:|.||:..|:..|..:.:.:.:...|||:.....:.:|||||:|       .|..|..: 
Zfish   466 QLKKKKLSPDAIAQLAFQMGFLRQYGQTVATYESCSTAAFKHGRTETIRPASIHTKQCAKAFVQ- 529

  Fly   468 LRASSNKQVGDMS---LARAFRRAVDEHKHFMNEARKGHGIDRHLFGLWCAAYESKMDIPAFYDD 529
                   |.|..|   |..........|.....||..|.|.|||||.:...|....|.:|:.|.|
Zfish   530 -------QPGQHSVEQLLGLLNECSKYHGQLTREAAMGQGFDRHLFAMRYLANSKGMALPSLYQD 587

  Fly   530 PMYTKSGGGGNFVLSSSTLGFTA-NVGFVAPMVFDGYGVFYSITSEAVFINTTAY-----RDSLK 588
            |.|...   .:.:||:|||...| ::|..||:|.||:||.|.:..|.:..|.::|     .:.|:
Zfish   588 PAYAAI---NHNILSTSTLTSPAVSLGGFAPVVPDGFGVGYGVHDEWIGCNVSSYPARDVHEFLR 649

  Fly   589 TSARKFNDIF 598
            ...:...|||
Zfish   650 CVHKSLEDIF 659

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CROTNP_001334704.1 None
cpt2NP_001007448.1 Carn_acyltransf 60..659 CDD:279140 169/637 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D167256at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.920

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